Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RTL9Q8NET4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.28■■□□□ 1
RTL9Q8NET4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.28■■□□□ 1
RTL9Q8NET4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
RTL9Q8NET4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.28■■□□□ 1
RTL9Q8NET4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
RTL9Q8NET4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.28■■□□□ 1
RTL9Q8NET4 AC092902.6-201ENST00000641783 218 ntBASIC21.28■■□□□ 1
RTL9Q8NET4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RTL9Q8NET4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RTL9Q8NET4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.27■■□□□ 1
RTL9Q8NET4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.27■■□□□ 1
RTL9Q8NET4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.27■■□□□ 1
RTL9Q8NET4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.27■■□□□ 1
RTL9Q8NET4 ADH5P3-201ENST00000433842 1137 ntBASIC21.27■■□□□ 1
RTL9Q8NET4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.27■■□□□ 1
RTL9Q8NET4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.27■■□□□ 1
RTL9Q8NET4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.27■■□□□ 1
RTL9Q8NET4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.27■■□□□ 1
RTL9Q8NET4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.27■■□□□ 1
RTL9Q8NET4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.27■■□□□ 1
RTL9Q8NET4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.27■■□□□ 1
RTL9Q8NET4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RTL9Q8NET4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTL9Q8NET4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
RTL9Q8NET4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
RTL9Q8NET4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.27■■□□□ 1
RTL9Q8NET4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.27■■□□□ 1
RTL9Q8NET4 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.27■■□□□ 1
RTL9Q8NET4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.27■□□□□ 0.99
RTL9Q8NET4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
RTL9Q8NET4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL9Q8NET4 AC012317.2-201ENST00000623305 2251 ntBASIC21.25■□□□□ 0.99
RTL9Q8NET4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTL9Q8NET4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTL9Q8NET4 AC106028.4-201ENST00000614509 607 ntBASIC21.25■□□□□ 0.99
RTL9Q8NET4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTL9Q8NET4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTL9Q8NET4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTL9Q8NET4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTL9Q8NET4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTL9Q8NET4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTL9Q8NET4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTL9Q8NET4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTL9Q8NET4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.25■□□□□ 0.99
RTL9Q8NET4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTL9Q8NET4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.24■□□□□ 0.99
RTL9Q8NET4 AP000344.2-201ENST00000512987 629 ntBASIC21.24■□□□□ 0.99
RTL9Q8NET4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL9Q8NET4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL9Q8NET4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
RTL9Q8NET4 AL355312.1-201ENST00000407115 2176 ntBASIC21.24■□□□□ 0.99
RTL9Q8NET4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.24■□□□□ 0.99
RTL9Q8NET4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms