Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SMG8Q8ND04 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.64■□□□□ 0.57
SMG8Q8ND04 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG8Q8ND04 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG8Q8ND04 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG8Q8ND04 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMG8Q8ND04 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMG8Q8ND04 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG8Q8ND04 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG8Q8ND04 FAM185BP-201ENST00000443595 716 ntBASIC18.64■□□□□ 0.57
SMG8Q8ND04 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.64■□□□□ 0.57
SMG8Q8ND04 AC087163.2-201ENST00000457299 853 ntBASIC18.64■□□□□ 0.57
SMG8Q8ND04 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.64■□□□□ 0.57
SMG8Q8ND04 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.64■□□□□ 0.57
SMG8Q8ND04 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.64■□□□□ 0.57
SMG8Q8ND04 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG8Q8ND04 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.64■□□□□ 0.57
SMG8Q8ND04 C20orf181-201ENST00000623918 480 ntBASIC18.64■□□□□ 0.57
SMG8Q8ND04 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMG8Q8ND04 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SMG8Q8ND04 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMG8Q8ND04 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG8Q8ND04 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMG8Q8ND04 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG8Q8ND04 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMG8Q8ND04 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMG8Q8ND04 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG8Q8ND04 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMG8Q8ND04 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 AC211486.1-202ENST00000416371 468 ntBASIC18.63■□□□□ 0.57
SMG8Q8ND04 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 AC211476.1-201ENST00000503899 468 ntBASIC18.63■□□□□ 0.57
SMG8Q8ND04 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 MIR4469-201ENST00000583919 79 ntBASIC18.63■□□□□ 0.57
SMG8Q8ND04 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 AL078644.1-201ENST00000609881 752 ntBASIC18.63■□□□□ 0.57
SMG8Q8ND04 ACTL9-202ENST00000612068 1252 ntBASIC18.63■□□□□ 0.57
SMG8Q8ND04 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG8Q8ND04 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG8Q8ND04 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG8Q8ND04 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SMG8Q8ND04 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMG8Q8ND04 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG8Q8ND04 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SMG8Q8ND04 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMG8Q8ND04 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMG8Q8ND04 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMG8Q8ND04 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.62■□□□□ 0.57
SMG8Q8ND04 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMG8Q8ND04 HTR5BP-201ENST00000430851 1154 ntBASIC18.62■□□□□ 0.57
SMG8Q8ND04 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.62■□□□□ 0.57
SMG8Q8ND04 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.62■□□□□ 0.57
SMG8Q8ND04 DNAJB3-202ENST00000449667 1266 ntBASIC18.62■□□□□ 0.57
SMG8Q8ND04 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.62■□□□□ 0.57
SMG8Q8ND04 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.62■□□□□ 0.57
SMG8Q8ND04 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.62■□□□□ 0.57
SMG8Q8ND04 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.62■□□□□ 0.57
SMG8Q8ND04 AC023141.13-201ENST00000604991 943 ntBASIC18.62■□□□□ 0.57
SMG8Q8ND04 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.62■□□□□ 0.57
SMG8Q8ND04 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMG8Q8ND04 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.62■□□□□ 0.57
SMG8Q8ND04 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
SMG8Q8ND04 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.61■□□□□ 0.57
SMG8Q8ND04 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SMG8Q8ND04 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SMG8Q8ND04 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SMG8Q8ND04 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.61■□□□□ 0.57
SMG8Q8ND04 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.61■□□□□ 0.57
SMG8Q8ND04 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.61■□□□□ 0.57
SMG8Q8ND04 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SMG8Q8ND04 AP006288.1-201ENST00000446065 395 ntBASIC18.61■□□□□ 0.57
SMG8Q8ND04 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.61■□□□□ 0.57
SMG8Q8ND04 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMG8Q8ND04 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMG8Q8ND04 AC026471.1-201ENST00000564629 3026 ntBASIC18.6■□□□□ 0.57
SMG8Q8ND04 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMG8Q8ND04 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMG8Q8ND04 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms