Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 RCN1P2-201ENST00000398357 915 ntBASIC17.9■□□□□ 0.46
PAF1Q8N7H5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 AC007967.3-201ENST00000434308 558 ntBASIC17.9■□□□□ 0.46
PAF1Q8N7H5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 KRT126P-201ENST00000549467 1181 ntBASIC17.9■□□□□ 0.46
PAF1Q8N7H5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 IFNL4P1-201ENST00000607083 540 ntBASIC17.9■□□□□ 0.46
PAF1Q8N7H5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PAF1Q8N7H5 AC012317.2-201ENST00000623305 2251 ntBASIC17.89■□□□□ 0.46
PAF1Q8N7H5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.89■□□□□ 0.46
PAF1Q8N7H5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
PAF1Q8N7H5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PAF1Q8N7H5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.88■□□□□ 0.45
PAF1Q8N7H5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 DDX43P3-201ENST00000441064 443 ntBASIC17.88■□□□□ 0.45
PAF1Q8N7H5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 MIR5100-201ENST00000579544 119 ntBASIC17.88■□□□□ 0.45
PAF1Q8N7H5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PAF1Q8N7H5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PAF1Q8N7H5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PAF1Q8N7H5 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PAF1Q8N7H5 AC010460.3-201ENST00000511359 1579 ntBASIC17.87■□□□□ 0.45
PAF1Q8N7H5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.87■□□□□ 0.45
PAF1Q8N7H5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms