Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
ATPAF2Q8N5M1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 AP005117.1-201ENST00000584346 1413 ntBASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 AC108860.2-201ENST00000562760 2183 ntBASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 RBM17P3-201ENST00000417687 1192 ntBASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 AC106795.1-205ENST00000512851 1056 ntBASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 AC106820.2-201ENST00000563775 3264 ntBASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
ATPAF2Q8N5M1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 AC148477.5-201ENST00000625164 1645 ntBASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 SIGLEC30P-201ENST00000455569 941 ntBASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 IFNL4P1-201ENST00000607083 540 ntBASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms