Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST3Q8N1M1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.16■□□□□ 0.18
BEST3Q8N1M1 AC067852.2-201ENST00000590513 2313 ntBASIC16.16■□□□□ 0.18
BEST3Q8N1M1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 AC003669.1-201ENST00000334569 611 ntBASIC16.15■□□□□ 0.18
BEST3Q8N1M1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 AC006557.2-201ENST00000592985 1240 ntBASIC16.15■□□□□ 0.18
BEST3Q8N1M1 Z83851.2-201ENST00000609564 659 ntBASIC16.15■□□□□ 0.18
BEST3Q8N1M1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 MIR1199-201ENST00000621445 119 ntBASIC16.15■□□□□ 0.18
BEST3Q8N1M1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 AC117500.6-201ENST00000624871 588 ntBASIC16.15■□□□□ 0.18
BEST3Q8N1M1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
BEST3Q8N1M1 KRT18P55-202ENST00000578578 1546 ntBASIC16.14■□□□□ 0.18
BEST3Q8N1M1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 IGHV3-52-201ENST00000519770 353 ntBASIC16.14■□□□□ 0.17
BEST3Q8N1M1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 AC034105.1-201ENST00000563488 319 ntBASIC16.14■□□□□ 0.17
BEST3Q8N1M1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 AL356488.2-201ENST00000602755 427 ntBASIC16.14■□□□□ 0.17
BEST3Q8N1M1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 AC139713.2-201ENST00000641328 2723 ntBASIC16.14■□□□□ 0.17
BEST3Q8N1M1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.14■□□□□ 0.17
BEST3Q8N1M1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST3Q8N1M1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms