Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX5Q8N196 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SIX5Q8N196 AC098818.2-201ENST00000564925 2320 ntBASIC17.75■□□□□ 0.43
SIX5Q8N196 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX5Q8N196 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SIX5Q8N196 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX5Q8N196 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SIX5Q8N196 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX5Q8N196 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SIX5Q8N196 AC005237.2-201ENST00000434368 219 ntBASIC17.75■□□□□ 0.43
SIX5Q8N196 AC002472.2-201ENST00000442739 958 ntBASIC17.75■□□□□ 0.43
SIX5Q8N196 AL513480.1-201ENST00000451731 511 ntBASIC17.75■□□□□ 0.43
SIX5Q8N196 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SIX5Q8N196 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX5Q8N196 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX5Q8N196 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.75■□□□□ 0.43
SIX5Q8N196 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.75■□□□□ 0.43
SIX5Q8N196 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.75■□□□□ 0.43
SIX5Q8N196 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX5Q8N196 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SIX5Q8N196 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX5Q8N196 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SIX5Q8N196 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SIX5Q8N196 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX5Q8N196 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.74■□□□□ 0.43
SIX5Q8N196 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.74■□□□□ 0.43
SIX5Q8N196 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SIX5Q8N196 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 PHGDH-209ENST00000641074 1780 ntBASIC17.74■□□□□ 0.43
SIX5Q8N196 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.74■□□□□ 0.43
SIX5Q8N196 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.74■□□□□ 0.43
SIX5Q8N196 AC055876.3-201ENST00000431496 288 ntBASIC17.74■□□□□ 0.43
SIX5Q8N196 ADH5P3-201ENST00000433842 1137 ntBASIC17.74■□□□□ 0.43
SIX5Q8N196 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.74■□□□□ 0.43
SIX5Q8N196 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.74■□□□□ 0.43
SIX5Q8N196 DUTP2-201ENST00000519164 463 ntBASIC17.74■□□□□ 0.43
SIX5Q8N196 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.74■□□□□ 0.43
SIX5Q8N196 AC138649.4-201ENST00000612222 287 ntBASIC17.74■□□□□ 0.43
SIX5Q8N196 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SIX5Q8N196 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.74■□□□□ 0.43
SIX5Q8N196 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SIX5Q8N196 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX5Q8N196 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.73■□□□□ 0.43
SIX5Q8N196 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.73■□□□□ 0.43
SIX5Q8N196 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.73■□□□□ 0.43
SIX5Q8N196 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.73■□□□□ 0.43
SIX5Q8N196 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SIX5Q8N196 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.73■□□□□ 0.43
SIX5Q8N196 FAM185BP-201ENST00000443595 716 ntBASIC17.73■□□□□ 0.43
SIX5Q8N196 TSPY16P-201ENST00000449843 468 ntBASIC17.73■□□□□ 0.43
SIX5Q8N196 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.73■□□□□ 0.43
SIX5Q8N196 IGHV3-52-201ENST00000519770 353 ntBASIC17.73■□□□□ 0.43
SIX5Q8N196 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.73■□□□□ 0.43
SIX5Q8N196 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX5Q8N196 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.73■□□□□ 0.43
SIX5Q8N196 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.73■□□□□ 0.43
SIX5Q8N196 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.73■□□□□ 0.43
SIX5Q8N196 AC026120.1-201ENST00000611536 926 ntBASIC17.73■□□□□ 0.43
SIX5Q8N196 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SIX5Q8N196 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms