Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLX4Q8IY92 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLX4Q8IY92 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLX4Q8IY92 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLX4Q8IY92 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLX4Q8IY92 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.92■□□□□ 0.94
SLX4Q8IY92 AL031055.1-201ENST00000606362 631 ntBASIC20.92■□□□□ 0.94
SLX4Q8IY92 AC008267.7-201ENST00000624570 1194 ntBASIC20.92■□□□□ 0.94
SLX4Q8IY92 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLX4Q8IY92 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.91■□□□□ 0.94
SLX4Q8IY92 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SLX4Q8IY92 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 RNU1-129P-201ENST00000384064 167 ntBASIC20.91■□□□□ 0.94
SLX4Q8IY92 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.91■□□□□ 0.94
SLX4Q8IY92 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
SLX4Q8IY92 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 AC010336.2-201ENST00000564226 506 ntBASIC20.91■□□□□ 0.94
SLX4Q8IY92 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 U1.21-201ENST00000580816 167 ntBASIC20.91■□□□□ 0.94
SLX4Q8IY92 AL662799.1-202ENST00000614205 422 ntBASIC20.91■□□□□ 0.94
SLX4Q8IY92 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.91■□□□□ 0.94
SLX4Q8IY92 LINC00304-203ENST00000565008 1864 ntBASIC20.91■□□□□ 0.94
SLX4Q8IY92 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.91■□□□□ 0.94
SLX4Q8IY92 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLX4Q8IY92 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.91■□□□□ 0.94
SLX4Q8IY92 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 AC109635.5-201ENST00000533593 962 ntBASIC20.9■□□□□ 0.94
SLX4Q8IY92 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 AC022144.1-201ENST00000602255 1580 ntBASIC20.9■□□□□ 0.94
SLX4Q8IY92 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLX4Q8IY92 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 CR383656.12-201ENST00000549567 513 ntBASIC20.9■□□□□ 0.94
SLX4Q8IY92 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.9■□□□□ 0.94
SLX4Q8IY92 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.89■□□□□ 0.94
SLX4Q8IY92 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLX4Q8IY92 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SLX4Q8IY92 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.89■□□□□ 0.93
SLX4Q8IY92 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
SLX4Q8IY92 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
SLX4Q8IY92 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLX4Q8IY92 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SLX4Q8IY92 PIN1P1-201ENST00000412108 996 ntBASIC20.89■□□□□ 0.93
SLX4Q8IY92 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.89■□□□□ 0.93
SLX4Q8IY92 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.89■□□□□ 0.93
SLX4Q8IY92 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLX4Q8IY92 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.89■□□□□ 0.93
SLX4Q8IY92 MIR3909-201ENST00000579518 119 ntBASIC20.89■□□□□ 0.93
SLX4Q8IY92 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SLX4Q8IY92 AC073592.8-201ENST00000624126 511 ntBASIC20.89■□□□□ 0.93
SLX4Q8IY92 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLX4Q8IY92 SLC22A20-204ENST00000530038 1673 ntBASIC20.89■□□□□ 0.93
SLX4Q8IY92 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms