Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AP005117.1-201ENST00000584346 1413 ntBASIC15.37■□□□□ 0.05
RTTNQ86VV8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 AC138894.3-201ENST00000603787 634 ntBASIC15.37■□□□□ 0.05
RTTNQ86VV8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTTNQ86VV8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
RTTNQ86VV8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 AC073648.2-201ENST00000510116 352 ntBASIC15.36■□□□□ 0.05
RTTNQ86VV8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 AL773604.1-201ENST00000617417 272 ntBASIC15.36■□□□□ 0.05
RTTNQ86VV8 AC055717.3-201ENST00000622967 595 ntBASIC15.36■□□□□ 0.05
RTTNQ86VV8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 AC133963.1-201ENST00000504166 1679 ntBASIC15.36■□□□□ 0.05
RTTNQ86VV8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 BX842568.4-201ENST00000421222 227 ntBASIC15.36■□□□□ 0.05
RTTNQ86VV8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 AC125634.1-201ENST00000438758 1403 ntBASIC15.36■□□□□ 0.05
RTTNQ86VV8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.36■□□□□ 0.05
RTTNQ86VV8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTTNQ86VV8 AC004817.3-201ENST00000602957 2129 ntBASIC15.36■□□□□ 0.05
RTTNQ86VV8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 AC109462.3-201ENST00000573934 613 ntBASIC15.35■□□□□ 0.05
RTTNQ86VV8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RTTNQ86VV8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTTNQ86VV8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms