Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 AL138688.1-201ENST00000624851 1594 ntBASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 AP002414.3-201ENST00000589352 1468 ntBASIC17.05■□□□□ 0.32
LRRTM4Q86VH4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 AC136632.2-201ENST00000512891 861 ntBASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 AL356488.2-201ENST00000602755 427 ntBASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 AL353135.1-201ENST00000606729 504 ntBASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 PGM5P2-202ENST00000637225 1043 ntBASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRTM4Q86VH4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 AC073621.1-201ENST00000392730 636 ntBASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 ELK2BP-201ENST00000415014 1224 ntBASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 AC098831.1-202ENST00000438821 336 ntBASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 AC005593.1-201ENST00000624894 515 ntBASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms