Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 NOP2-211ENST00000540228 668 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 AC005237.2-201ENST00000434368 219 ntBASIC11.96□□□□□ -0.49
CSMD3Q7Z407 RPS2P32-201ENST00000439199 892 ntBASIC11.96□□□□□ -0.49
CSMD3Q7Z407 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD3Q7Z407 AC026150.2-201ENST00000564693 1156 ntBASIC11.96□□□□□ -0.49
CSMD3Q7Z407 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 IGHV3-71-201ENST00000523324 359 ntBASIC11.96□□□□□ -0.5
CSMD3Q7Z407 AC069120.2-201ENST00000524091 540 ntBASIC11.96□□□□□ -0.5
CSMD3Q7Z407 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CSMD3Q7Z407 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 RBPMS2P1-201ENST00000437762 623 ntBASIC11.95□□□□□ -0.5
CSMD3Q7Z407 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 UXT-AS1-201ENST00000590504 1525 ntBASIC11.95□□□□□ -0.5
CSMD3Q7Z407 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 AC087163.2-201ENST00000457299 853 ntBASIC11.95□□□□□ -0.5
CSMD3Q7Z407 DUTP2-201ENST00000519164 463 ntBASIC11.95□□□□□ -0.5
CSMD3Q7Z407 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.95□□□□□ -0.5
CSMD3Q7Z407 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms