Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 RN7SL606P-201ENST00000472779 293 ntBASIC11.56□□□□□ -0.56
SCXQ7RTU7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 AC011840.4-201ENST00000578471 627 ntBASIC11.56□□□□□ -0.56
SCXQ7RTU7 AL353801.3-201ENST00000609898 542 ntBASIC11.56□□□□□ -0.56
SCXQ7RTU7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 AC004263.2-201ENST00000617183 678 ntBASIC11.56□□□□□ -0.56
SCXQ7RTU7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC11.56□□□□□ -0.56
SCXQ7RTU7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SCXQ7RTU7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 ESPNP-201ENST00000270691 2015 ntBASIC11.55□□□□□ -0.56
SCXQ7RTU7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 MIR149-201ENST00000384879 89 ntBASIC11.55□□□□□ -0.56
SCXQ7RTU7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 IGHV3-47-201ENST00000425060 335 ntBASIC11.55□□□□□ -0.56
SCXQ7RTU7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 AP005901.3-202ENST00000581653 237 ntBASIC11.55□□□□□ -0.56
SCXQ7RTU7 LINC00896-202ENST00000609602 2128 ntBASIC11.55□□□□□ -0.56
SCXQ7RTU7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 AC009102.3-201ENST00000623118 1491 ntBASIC11.55□□□□□ -0.56
SCXQ7RTU7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.55□□□□□ -0.56
SCXQ7RTU7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SCXQ7RTU7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SCXQ7RTU7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SCXQ7RTU7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SCXQ7RTU7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms