Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 AD001527.2-201ENST00000622994 785 ntBASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST2H3AQ71DI3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 INTS4P1-201ENST00000438455 1935 ntBASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 ATP5G2P1-201ENST00000433580 426 ntBASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 AC069148.1-201ENST00000608741 768 ntBASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HIST2H3AQ71DI3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 AC008894.3-201ENST00000624324 3103 ntBASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 AC046185.3-201ENST00000623228 1824 ntBASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 CROCCP1-201ENST00000426910 5675 ntBASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST2H3AQ71DI3 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HIST2H3AQ71DI3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms