Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 AC140658.5-201ENST00000438532 169 ntBASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 AC025678.2-201ENST00000562061 970 ntBASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 AC026120.1-201ENST00000611536 926 ntBASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 TNXA-203ENST00000507684 2038 ntBASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAF7Q6Q0C0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 AC002056.1-201ENST00000395613 760 ntBASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 TIMM8BP1-201ENST00000452384 211 ntBASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAF7Q6Q0C0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 HCG11-201ENST00000411553 5696 ntBASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAF7Q6Q0C0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF7Q6Q0C0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF7Q6Q0C0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRAF7Q6Q0C0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAF7Q6Q0C0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF7Q6Q0C0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAF7Q6Q0C0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAF7Q6Q0C0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
TRAF7Q6Q0C0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms