Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 SPDYE19P-201ENST00000338590 713 ntBASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 AC018445.3-201ENST00000624177 1945 ntBASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PRPF38BQ5VTL8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 BTBD7P1-201ENST00000447253 1453 ntBASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AC027307.2-201ENST00000591252 911 ntBASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AC015936.2-201ENST00000593177 259 ntBASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 TEX28P1-201ENST00000613479 1221 ntBASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 TEX28P2-201ENST00000617764 1221 ntBASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRPF38BQ5VTL8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRPF38BQ5VTL8 FP475955.4-201ENST00000623131 1990 ntBASIC18.64■□□□□ 0.58
PRPF38BQ5VTL8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 KRT8P13-201ENST00000463294 1010 ntBASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 DOC2GP-202ENST00000514950 1163 ntBASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 MIR4706-201ENST00000582134 82 ntBASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms