Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNA5SP415-201ENST00000517246 115 ntBASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 AL356488.2-201ENST00000602755 427 ntBASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 FAM197Y3-203ENST00000618346 717 ntBASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC144BQ3MJ40 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 AC007967.3-201ENST00000434308 558 ntBASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 Z83851.2-201ENST00000609564 659 ntBASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 AP000867.4-201ENST00000641616 219 ntBASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC144BQ3MJ40 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 AC132938.6-201ENST00000623828 1655 ntBASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 FAM220CP-201ENST00000395253 831 ntBASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 AC107918.4-202ENST00000641623 219 ntBASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCDC144BQ3MJ40 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144BQ3MJ40 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144BQ3MJ40 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144BQ3MJ40 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144BQ3MJ40 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144BQ3MJ40 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144BQ3MJ40 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144BQ3MJ40 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144BQ3MJ40 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144BQ3MJ40 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144BQ3MJ40 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144BQ3MJ40 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms