Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.21■□□□□ 0.18
RFX4Q33E94 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.21■□□□□ 0.18
RFX4Q33E94 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.18
RFX4Q33E94 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RFX4Q33E94 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
RFX4Q33E94 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 AC006449.5-201ENST00000610658 2098 ntBASIC16.2■□□□□ 0.18
RFX4Q33E94 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RFX4Q33E94 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFX4Q33E94 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 MMP23A-201ENST00000234610 1017 ntBASIC16.2■□□□□ 0.18
RFX4Q33E94 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RFX4Q33E94 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RFX4Q33E94 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
RFX4Q33E94 TSPY15P-201ENST00000457163 923 ntBASIC16.2■□□□□ 0.18
RFX4Q33E94 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.2■□□□□ 0.18
RFX4Q33E94 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 MIR4497-201ENST00000583208 89 ntBASIC16.2■□□□□ 0.18
RFX4Q33E94 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.2■□□□□ 0.18
RFX4Q33E94 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.2■□□□□ 0.18
RFX4Q33E94 FAM87A-204ENST00000613235 858 ntBASIC16.2■□□□□ 0.18
RFX4Q33E94 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.2■□□□□ 0.18
RFX4Q33E94 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RFX4Q33E94 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.2■□□□□ 0.18
RFX4Q33E94 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
RFX4Q33E94 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RFX4Q33E94 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.2■□□□□ 0.18
RFX4Q33E94 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.2■□□□□ 0.18
RFX4Q33E94 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 AC011270.2-201ENST00000624293 2550 ntBASIC16.2■□□□□ 0.18
RFX4Q33E94 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFX4Q33E94 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 AC046185.3-201ENST00000623228 1824 ntBASIC16.19■□□□□ 0.18
RFX4Q33E94 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.19■□□□□ 0.18
RFX4Q33E94 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.19■□□□□ 0.18
RFX4Q33E94 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.19■□□□□ 0.18
RFX4Q33E94 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RFX4Q33E94 AC008894.3-201ENST00000624324 3103 ntBASIC16.19■□□□□ 0.18
RFX4Q33E94 PKD1P5-201ENST00000532415 10291 ntBASIC16.19■□□□□ 0.18
RFX4Q33E94 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RFX4Q33E94 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.19■□□□□ 0.18
RFX4Q33E94 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.19■□□□□ 0.18
RFX4Q33E94 ECEL1P2-202ENST00000465689 757 ntBASIC16.19■□□□□ 0.18
RFX4Q33E94 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.19■□□□□ 0.18
RFX4Q33E94 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RFX4Q33E94 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.19■□□□□ 0.18
RFX4Q33E94 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.19■□□□□ 0.18
RFX4Q33E94 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.19■□□□□ 0.18
RFX4Q33E94 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFX4Q33E94 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RFX4Q33E94 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.19■□□□□ 0.18
RFX4Q33E94 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX4Q33E94 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms