Protein–RNA interactions for Protein: Q2VWP7

PRTG, Protogenin, humanhuman

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTGQ2VWP7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTGQ2VWP7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTGQ2VWP7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PRTGQ2VWP7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PRTGQ2VWP7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRTGQ2VWP7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 AP002414.1-201ENST00000391405 1147 ntBASIC16.4■□□□□ 0.22
PRTGQ2VWP7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 AC009947.1-201ENST00000444350 727 ntBASIC16.4■□□□□ 0.22
PRTGQ2VWP7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 IGHV3-65-201ENST00000523210 341 ntBASIC16.4■□□□□ 0.22
PRTGQ2VWP7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 AC034105.1-201ENST00000563488 319 ntBASIC16.4■□□□□ 0.22
PRTGQ2VWP7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 AC008667.4-201ENST00000607370 168 ntBASIC16.4■□□□□ 0.22
PRTGQ2VWP7 Z83851.2-201ENST00000609564 659 ntBASIC16.4■□□□□ 0.22
PRTGQ2VWP7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.4■□□□□ 0.22
PRTGQ2VWP7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
PRTGQ2VWP7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
PRTGQ2VWP7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
PRTGQ2VWP7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 AC104109.2-201ENST00000602919 1418 ntBASIC16.39■□□□□ 0.21
PRTGQ2VWP7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 SLC25A1P3-201ENST00000395415 828 ntBASIC16.39■□□□□ 0.21
PRTGQ2VWP7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 TERC-201ENST00000602385 541 ntBASIC16.39■□□□□ 0.21
PRTGQ2VWP7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PRTGQ2VWP7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRTGQ2VWP7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms