Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.17■□□□□ 0.82
SHROOM1Q2M3G4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
SHROOM1Q2M3G4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHROOM1Q2M3G4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHROOM1Q2M3G4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.17■□□□□ 0.82
SHROOM1Q2M3G4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHROOM1Q2M3G4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHROOM1Q2M3G4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHROOM1Q2M3G4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.17■□□□□ 0.82
SHROOM1Q2M3G4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHROOM1Q2M3G4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHROOM1Q2M3G4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 AC007613.1-201ENST00000572811 2597 ntBASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 AL513480.1-201ENST00000451731 511 ntBASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 AC093028.1-201ENST00000622998 982 ntBASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SHROOM1Q2M3G4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 CYMP-203ENST00000474680 1263 ntBASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 AC068137.2-201ENST00000605408 478 ntBASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.15■□□□□ 0.82
SHROOM1Q2M3G4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
SHROOM1Q2M3G4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 AC106028.4-201ENST00000614509 607 ntBASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 AC007064.4-201ENST00000637740 555 ntBASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SHROOM1Q2M3G4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM1Q2M3G4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.13■□□□□ 0.81
SHROOM1Q2M3G4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM1Q2M3G4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM1Q2M3G4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM1Q2M3G4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.13■□□□□ 0.81
SHROOM1Q2M3G4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHROOM1Q2M3G4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.13■□□□□ 0.81
SHROOM1Q2M3G4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SHROOM1Q2M3G4 AL390961.4-201ENST00000623958 2535 ntBASIC20.13■□□□□ 0.81
SHROOM1Q2M3G4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms