Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC104819.1-201ENST00000504587 486 ntBASIC17.58■□□□□ 0.4
CDH17Q12864 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH17Q12864 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH17Q12864 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDH17Q12864 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH17Q12864 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CDH17Q12864 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH17Q12864 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH17Q12864 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH17Q12864 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH17Q12864 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH17Q12864 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
CDH17Q12864 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDH17Q12864 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH17Q12864 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 AC132938.5-201ENST00000624980 1813 ntBASIC17.57■□□□□ 0.4
CDH17Q12864 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH17Q12864 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 ARMC10P1-201ENST00000313754 855 ntBASIC17.57■□□□□ 0.4
CDH17Q12864 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
CDH17Q12864 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CDH17Q12864 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDH17Q12864 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.57■□□□□ 0.4
CDH17Q12864 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH17Q12864 AP000867.3-201ENST00000524675 377 ntBASIC17.57■□□□□ 0.4
CDH17Q12864 AC012615.1-201ENST00000565797 1299 ntBASIC17.57■□□□□ 0.4
CDH17Q12864 AC092329.2-201ENST00000598402 547 ntBASIC17.57■□□□□ 0.4
CDH17Q12864 AL445228.2-201ENST00000605589 952 ntBASIC17.57■□□□□ 0.4
CDH17Q12864 AC114341.1-201ENST00000618070 349 ntBASIC17.57■□□□□ 0.4
CDH17Q12864 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH17Q12864 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH17Q12864 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH17Q12864 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH17Q12864 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CDH17Q12864 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH17Q12864 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDH17Q12864 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CDH17Q12864 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH17Q12864 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CDH17Q12864 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH17Q12864 RCN1P2-201ENST00000398357 915 ntBASIC17.56■□□□□ 0.4
CDH17Q12864 KLF4P1-201ENST00000412782 1185 ntBASIC17.56■□□□□ 0.4
CDH17Q12864 POM121L3P-201ENST00000419331 1163 ntBASIC17.56■□□□□ 0.4
CDH17Q12864 ATP5G2P1-201ENST00000433580 426 ntBASIC17.56■□□□□ 0.4
CDH17Q12864 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH17Q12864 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH17Q12864 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH17Q12864 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH17Q12864 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH17Q12864 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH17Q12864 AC073592.5-201ENST00000624854 528 ntBASIC17.56■□□□□ 0.4
CDH17Q12864 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CDH17Q12864 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH17Q12864 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH17Q12864 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH17Q12864 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH17Q12864 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDH17Q12864 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH17Q12864 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH17Q12864 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH17Q12864 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDH17Q12864 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms