Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CLDN20P56880 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 CICP6-201ENST00000457191 2729 ntBASIC15.98■□□□□ 0.15
CLDN20P56880 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDN20P56880 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CLDN20P56880 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDN20P56880 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN20P56880 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN20P56880 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CLDN20P56880 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN20P56880 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN20P56880 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN20P56880 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLDN20P56880 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDN20P56880 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CLDN20P56880 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN20P56880 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CLDN20P56880 EMBP1-201ENST00000458200 901 ntBASIC15.97■□□□□ 0.15
CLDN20P56880 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.97■□□□□ 0.15
CLDN20P56880 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDN20P56880 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.97■□□□□ 0.15
CLDN20P56880 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CLDN20P56880 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CLDN20P56880 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN20P56880 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN20P56880 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN20P56880 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN20P56880 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN20P56880 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.96■□□□□ 0.15
CLDN20P56880 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CLDN20P56880 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDN20P56880 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CLDN20P56880 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN20P56880 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN20P56880 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDN20P56880 AC132008.2-207ENST00000454517 770 ntBASIC15.96■□□□□ 0.15
CLDN20P56880 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDN20P56880 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN20P56880 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.96■□□□□ 0.15
CLDN20P56880 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.96■□□□□ 0.15
CLDN20P56880 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLDN20P56880 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.96■□□□□ 0.15
CLDN20P56880 AC116407.2-201ENST00000613639 860 ntBASIC15.96■□□□□ 0.15
CLDN20P56880 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CLDN20P56880 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN20P56880 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CLDN20P56880 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN20P56880 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CLDN20P56880 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLDN20P56880 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLDN20P56880 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN20P56880 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN20P56880 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN20P56880 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN20P56880 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN20P56880 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CLDN20P56880 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLDN20P56880 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN20P56880 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN20P56880 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLDN20P56880 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN20P56880 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN20P56880 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms