Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPT1AP50416 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CPT1AP50416 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CPT1AP50416 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPT1AP50416 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.14■□□□□ 0.65
CPT1AP50416 AL355306.1-201ENST00000415580 579 ntBASIC19.14■□□□□ 0.65
CPT1AP50416 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPT1AP50416 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
CPT1AP50416 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.14■□□□□ 0.65
CPT1AP50416 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CPT1AP50416 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.14■□□□□ 0.65
CPT1AP50416 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.14■□□□□ 0.65
CPT1AP50416 LINC00628-201ENST00000628516 1289 ntBASIC19.14■□□□□ 0.65
CPT1AP50416 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.14■□□□□ 0.65
CPT1AP50416 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPT1AP50416 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPT1AP50416 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CPT1AP50416 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.14■□□□□ 0.65
CPT1AP50416 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
CPT1AP50416 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPT1AP50416 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CPT1AP50416 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPT1AP50416 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.14■□□□□ 0.65
CPT1AP50416 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPT1AP50416 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPT1AP50416 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPT1AP50416 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPT1AP50416 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.13■□□□□ 0.65
CPT1AP50416 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPT1AP50416 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CPT1AP50416 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPT1AP50416 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPT1AP50416 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPT1AP50416 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CPT1AP50416 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.13■□□□□ 0.65
CPT1AP50416 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CPT1AP50416 AL671277.1-201ENST00000429656 993 ntBASIC19.13■□□□□ 0.65
CPT1AP50416 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.13■□□□□ 0.65
CPT1AP50416 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CPT1AP50416 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.13■□□□□ 0.65
CPT1AP50416 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.13■□□□□ 0.65
CPT1AP50416 AC109322.1-201ENST00000524499 1264 ntBASIC19.13■□□□□ 0.65
CPT1AP50416 AC107918.2-201ENST00000530817 355 ntBASIC19.13■□□□□ 0.65
CPT1AP50416 SPCS2P1-201ENST00000561636 679 ntBASIC19.13■□□□□ 0.65
CPT1AP50416 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
CPT1AP50416 AC093512.1-201ENST00000617969 520 ntBASIC19.13■□□□□ 0.65
CPT1AP50416 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.13■□□□□ 0.65
CPT1AP50416 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CPT1AP50416 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPT1AP50416 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CPT1AP50416 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPT1AP50416 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPT1AP50416 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPT1AP50416 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CPT1AP50416 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CPT1AP50416 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.12■□□□□ 0.65
CPT1AP50416 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.12■□□□□ 0.65
CPT1AP50416 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CPT1AP50416 ABALON-201ENST00000629058 1903 ntBASIC19.12■□□□□ 0.65
CPT1AP50416 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
CPT1AP50416 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.12■□□□□ 0.65
CPT1AP50416 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 AL627223.1-201ENST00000416693 442 ntBASIC19.12■□□□□ 0.65
CPT1AP50416 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.12■□□□□ 0.65
CPT1AP50416 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.12■□□□□ 0.65
CPT1AP50416 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.12■□□□□ 0.65
CPT1AP50416 SPDYE11-202ENST00000450699 704 ntBASIC19.12■□□□□ 0.65
CPT1AP50416 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.12■□□□□ 0.65
CPT1AP50416 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.12■□□□□ 0.65
CPT1AP50416 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.12■□□□□ 0.65
CPT1AP50416 SPDYE9P-201ENST00000570642 692 ntBASIC19.12■□□□□ 0.65
CPT1AP50416 AC099522.2-201ENST00000607001 744 ntBASIC19.12■□□□□ 0.65
CPT1AP50416 SPDYE10P-202ENST00000612005 668 ntBASIC19.12■□□□□ 0.65
CPT1AP50416 SPDYE8P-202ENST00000612377 668 ntBASIC19.12■□□□□ 0.65
CPT1AP50416 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.12■□□□□ 0.65
CPT1AP50416 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPT1AP50416 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CPT1AP50416 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPT1AP50416 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.11■□□□□ 0.65
CPT1AP50416 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPT1AP50416 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPT1AP50416 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPT1AP50416 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.11■□□□□ 0.65
CPT1AP50416 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPT1AP50416 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.11■□□□□ 0.65
CPT1AP50416 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.11■□□□□ 0.65
CPT1AP50416 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms