Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
PSEN1P49768 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PSEN1P49768 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PSEN1P49768 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.51■□□□□ 0.55
PSEN1P49768 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.51■□□□□ 0.55
PSEN1P49768 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.51■□□□□ 0.55
PSEN1P49768 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.51■□□□□ 0.55
PSEN1P49768 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 AC079781.3-201ENST00000449110 356 ntBASIC18.51■□□□□ 0.55
PSEN1P49768 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
PSEN1P49768 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC18.51■□□□□ 0.55
PSEN1P49768 AP001269.4-201ENST00000609611 512 ntBASIC18.51■□□□□ 0.55
PSEN1P49768 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.51■□□□□ 0.55
PSEN1P49768 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.51■□□□□ 0.55
PSEN1P49768 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PSEN1P49768 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.51■□□□□ 0.55
PSEN1P49768 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.51■□□□□ 0.55
PSEN1P49768 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.51■□□□□ 0.55
PSEN1P49768 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PSEN1P49768 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PSEN1P49768 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PSEN1P49768 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.5■□□□□ 0.55
PSEN1P49768 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PSEN1P49768 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.5■□□□□ 0.55
PSEN1P49768 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.5■□□□□ 0.55
PSEN1P49768 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.5■□□□□ 0.55
PSEN1P49768 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.5■□□□□ 0.55
PSEN1P49768 PSAT1P2-201ENST00000426107 972 ntBASIC18.5■□□□□ 0.55
PSEN1P49768 SCARNA2-201ENST00000458748 420 ntBASIC18.5■□□□□ 0.55
PSEN1P49768 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.5■□□□□ 0.55
PSEN1P49768 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.5■□□□□ 0.55
PSEN1P49768 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.5■□□□□ 0.55
PSEN1P49768 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PSEN1P49768 AC009949.1-201ENST00000623048 1830 ntBASIC18.5■□□□□ 0.55
PSEN1P49768 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PSEN1P49768 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.5■□□□□ 0.55
PSEN1P49768 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PSEN1P49768 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.5■□□□□ 0.55
PSEN1P49768 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.49■□□□□ 0.55
PSEN1P49768 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSEN1P49768 KRT8P10-201ENST00000450021 1447 ntBASIC18.49■□□□□ 0.55
PSEN1P49768 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSEN1P49768 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.49■□□□□ 0.55
PSEN1P49768 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PSEN1P49768 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PSEN1P49768 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.49■□□□□ 0.55
PSEN1P49768 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PSEN1P49768 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PSEN1P49768 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSEN1P49768 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSEN1P49768 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PSEN1P49768 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.49■□□□□ 0.55
PSEN1P49768 SLC25A6P5-201ENST00000435663 894 ntBASIC18.49■□□□□ 0.55
PSEN1P49768 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.49■□□□□ 0.55
PSEN1P49768 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.49■□□□□ 0.55
PSEN1P49768 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.49■□□□□ 0.55
PSEN1P49768 MTDHP3-201ENST00000594186 672 ntBASIC18.49■□□□□ 0.55
PSEN1P49768 AC064862.7-201ENST00000604520 867 ntBASIC18.49■□□□□ 0.55
PSEN1P49768 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PSEN1P49768 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.49■□□□□ 0.55
PSEN1P49768 AD001527.2-201ENST00000622994 785 ntBASIC18.49■□□□□ 0.55
PSEN1P49768 AP000867.4-201ENST00000641616 219 ntBASIC18.49■□□□□ 0.55
PSEN1P49768 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PSEN1P49768 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.49■□□□□ 0.55
PSEN1P49768 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.49■□□□□ 0.55
PSEN1P49768 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSEN1P49768 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PSEN1P49768 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.49■□□□□ 0.55
PSEN1P49768 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PSEN1P49768 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSEN1P49768 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PSEN1P49768 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms