Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1DP48730 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1DP48730 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1DP48730 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.38■□□□□ 0.37
CSNK1DP48730 RNA5SP415-201ENST00000517246 115 ntBASIC17.38■□□□□ 0.37
CSNK1DP48730 UNC93B6-202ENST00000528242 690 ntBASIC17.38■□□□□ 0.37
CSNK1DP48730 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.38■□□□□ 0.37
CSNK1DP48730 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CSNK1DP48730 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CSNK1DP48730 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CSNK1DP48730 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CSNK1DP48730 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1DP48730 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CSNK1DP48730 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1DP48730 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1DP48730 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CSNK1DP48730 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CSNK1DP48730 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CSNK1DP48730 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.37■□□□□ 0.37
CSNK1DP48730 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.37■□□□□ 0.37
CSNK1DP48730 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.37■□□□□ 0.37
CSNK1DP48730 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.37■□□□□ 0.37
CSNK1DP48730 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.37■□□□□ 0.37
CSNK1DP48730 PAWRP1-201ENST00000451083 565 ntBASIC17.37■□□□□ 0.37
CSNK1DP48730 RPL13AP23-201ENST00000480739 586 ntBASIC17.37■□□□□ 0.37
CSNK1DP48730 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.37■□□□□ 0.37
CSNK1DP48730 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CSNK1DP48730 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CSNK1DP48730 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.37■□□□□ 0.37
CSNK1DP48730 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CSNK1DP48730 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.37■□□□□ 0.37
CSNK1DP48730 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.37■□□□□ 0.37
CSNK1DP48730 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CSNK1DP48730 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CSNK1DP48730 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CSNK1DP48730 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1DP48730 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CSNK1DP48730 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.36■□□□□ 0.37
CSNK1DP48730 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 AL023806.1-201ENST00000603994 1649 ntBASIC17.36■□□□□ 0.37
CSNK1DP48730 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CSNK1DP48730 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.36■□□□□ 0.37
CSNK1DP48730 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CSNK1DP48730 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.36■□□□□ 0.37
CSNK1DP48730 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.36■□□□□ 0.37
CSNK1DP48730 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.36■□□□□ 0.37
CSNK1DP48730 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.36■□□□□ 0.37
CSNK1DP48730 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.36■□□□□ 0.37
CSNK1DP48730 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.36■□□□□ 0.37
CSNK1DP48730 AC120114.3-201ENST00000611923 658 ntBASIC17.36■□□□□ 0.37
CSNK1DP48730 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CSNK1DP48730 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.36■□□□□ 0.37
CSNK1DP48730 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CSNK1DP48730 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1DP48730 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.35■□□□□ 0.37
CSNK1DP48730 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CSNK1DP48730 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms