Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CTNNA1P35221 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CTNNA1P35221 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CTNNA1P35221 COX5BP2-201ENST00000392354 334 ntBASIC18.39■□□□□ 0.53
CTNNA1P35221 AGGF1P2-201ENST00000426656 2106 ntBASIC18.39■□□□□ 0.53
CTNNA1P35221 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.39■□□□□ 0.53
CTNNA1P35221 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.39■□□□□ 0.53
CTNNA1P35221 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.39■□□□□ 0.53
CTNNA1P35221 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.39■□□□□ 0.53
CTNNA1P35221 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.39■□□□□ 0.53
CTNNA1P35221 RNF126P1-202ENST00000569893 925 ntBASIC18.39■□□□□ 0.53
CTNNA1P35221 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.39■□□□□ 0.53
CTNNA1P35221 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CTNNA1P35221 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CTNNA1P35221 AC006011.2-201ENST00000621313 1158 ntBASIC18.39■□□□□ 0.53
CTNNA1P35221 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.39■□□□□ 0.53
CTNNA1P35221 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CTNNA1P35221 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
CTNNA1P35221 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.39■□□□□ 0.53
CTNNA1P35221 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CTNNA1P35221 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CTNNA1P35221 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.39■□□□□ 0.53
CTNNA1P35221 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.38■□□□□ 0.53
CTNNA1P35221 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CTNNA1P35221 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CTNNA1P35221 Z83836.1-201ENST00000624605 1642 ntBASIC18.38■□□□□ 0.53
CTNNA1P35221 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.38■□□□□ 0.53
CTNNA1P35221 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.38■□□□□ 0.53
CTNNA1P35221 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.38■□□□□ 0.53
CTNNA1P35221 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.38■□□□□ 0.53
CTNNA1P35221 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.38■□□□□ 0.53
CTNNA1P35221 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CTNNA1P35221 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 SLC25A1P3-201ENST00000395415 828 ntBASIC18.38■□□□□ 0.53
CTNNA1P35221 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.38■□□□□ 0.53
CTNNA1P35221 SPDYE13P-201ENST00000445314 798 ntBASIC18.38■□□□□ 0.53
CTNNA1P35221 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.38■□□□□ 0.53
CTNNA1P35221 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.38■□□□□ 0.53
CTNNA1P35221 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.38■□□□□ 0.53
CTNNA1P35221 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CTNNA1P35221 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CTNNA1P35221 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.38■□□□□ 0.53
CTNNA1P35221 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNNA1P35221 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CTNNA1P35221 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.37■□□□□ 0.53
CTNNA1P35221 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.37■□□□□ 0.53
CTNNA1P35221 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CTNNA1P35221 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CTNNA1P35221 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.37■□□□□ 0.53
CTNNA1P35221 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CTNNA1P35221 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.37■□□□□ 0.53
CTNNA1P35221 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 KRT18P57-201ENST00000443599 1254 ntBASIC18.37■□□□□ 0.53
CTNNA1P35221 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.37■□□□□ 0.53
CTNNA1P35221 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.37■□□□□ 0.53
CTNNA1P35221 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.37■□□□□ 0.53
CTNNA1P35221 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.37■□□□□ 0.53
CTNNA1P35221 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.37■□□□□ 0.53
CTNNA1P35221 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CTNNA1P35221 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 FER1L4-210ENST00000615531 5998 ntBASIC18.37■□□□□ 0.53
CTNNA1P35221 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNNA1P35221 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CTNNA1P35221 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CTNNA1P35221 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms