Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA3P22001 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNA3P22001 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNA3P22001 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
KCNA3P22001 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNA3P22001 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.08■□□□□ 0.97
KCNA3P22001 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
KCNA3P22001 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNA3P22001 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
KCNA3P22001 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
KCNA3P22001 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.08■□□□□ 0.97
KCNA3P22001 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.08■□□□□ 0.97
KCNA3P22001 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.08■□□□□ 0.97
KCNA3P22001 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNA3P22001 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNA3P22001 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
KCNA3P22001 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.08■□□□□ 0.97
KCNA3P22001 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.08■□□□□ 0.97
KCNA3P22001 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.08■□□□□ 0.97
KCNA3P22001 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
KCNA3P22001 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KCNA3P22001 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
KCNA3P22001 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KCNA3P22001 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
KCNA3P22001 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA3P22001 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA3P22001 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA3P22001 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA3P22001 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA3P22001 WASH6P-202ENST00000359512 1437 ntBASIC21.07■□□□□ 0.96
KCNA3P22001 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA3P22001 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA3P22001 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.07■□□□□ 0.96
KCNA3P22001 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.07■□□□□ 0.96
KCNA3P22001 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC21.07■□□□□ 0.96
KCNA3P22001 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
KCNA3P22001 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.07■□□□□ 0.96
KCNA3P22001 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.07■□□□□ 0.96
KCNA3P22001 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
KCNA3P22001 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
KCNA3P22001 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA3P22001 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA3P22001 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA3P22001 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA3P22001 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNA3P22001 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.06■□□□□ 0.96
KCNA3P22001 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA3P22001 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA3P22001 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA3P22001 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
KCNA3P22001 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA3P22001 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KCNA3P22001 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.06■□□□□ 0.96
KCNA3P22001 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
KCNA3P22001 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.06■□□□□ 0.96
KCNA3P22001 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.06■□□□□ 0.96
KCNA3P22001 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.06■□□□□ 0.96
KCNA3P22001 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
KCNA3P22001 GPR53P-205ENST00000457298 1084 ntBASIC21.06■□□□□ 0.96
KCNA3P22001 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA3P22001 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.06■□□□□ 0.96
KCNA3P22001 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
KCNA3P22001 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.06■□□□□ 0.96
KCNA3P22001 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.06■□□□□ 0.96
KCNA3P22001 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.06■□□□□ 0.96
KCNA3P22001 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA3P22001 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA3P22001 AL020996.1-203ENST00000536896 2307 ntBASIC21.06■□□□□ 0.96
KCNA3P22001 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.06■□□□□ 0.96
KCNA3P22001 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNA3P22001 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA3P22001 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.05■□□□□ 0.96
KCNA3P22001 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
KCNA3P22001 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA3P22001 AC012569.1-201ENST00000591191 1524 ntBASIC21.05■□□□□ 0.96
KCNA3P22001 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.05■□□□□ 0.96
KCNA3P22001 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA3P22001 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.05■□□□□ 0.96
KCNA3P22001 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA3P22001 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA3P22001 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA3P22001 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
KCNA3P22001 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.05■□□□□ 0.96
KCNA3P22001 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.05■□□□□ 0.96
KCNA3P22001 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.05■□□□□ 0.96
KCNA3P22001 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.05■□□□□ 0.96
KCNA3P22001 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.05■□□□□ 0.96
KCNA3P22001 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA3P22001 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.05■□□□□ 0.96
KCNA3P22001 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.05■□□□□ 0.96
KCNA3P22001 SPDYE12P-201ENST00000618416 771 ntBASIC21.05■□□□□ 0.96
KCNA3P22001 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.05■□□□□ 0.96
KCNA3P22001 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
KCNA3P22001 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
KCNA3P22001 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA3P22001 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.05■□□□□ 0.96
KCNA3P22001 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA3P22001 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KCNA3P22001 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.04■□□□□ 0.96
KCNA3P22001 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms