Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
VCLP18206 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.53■□□□□ 0.4
VCLP18206 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.53■□□□□ 0.4
VCLP18206 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
VCLP18206 NUS1P2-201ENST00000417358 873 ntBASIC17.53■□□□□ 0.4
VCLP18206 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VCLP18206 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.53■□□□□ 0.4
VCLP18206 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.53■□□□□ 0.4
VCLP18206 AC005336.2-201ENST00000593183 939 ntBASIC17.53■□□□□ 0.4
VCLP18206 AL138831.2-201ENST00000606564 490 ntBASIC17.53■□□□□ 0.4
VCLP18206 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.53■□□□□ 0.4
VCLP18206 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.53■□□□□ 0.4
VCLP18206 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VCLP18206 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
VCLP18206 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
VCLP18206 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VCLP18206 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VCLP18206 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VCLP18206 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 AC097374.2-201ENST00000618617 1306 ntBASIC17.52■□□□□ 0.4
VCLP18206 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
VCLP18206 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
VCLP18206 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VCLP18206 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.52■□□□□ 0.4
VCLP18206 TSPY19P-201ENST00000418461 509 ntBASIC17.52■□□□□ 0.4
VCLP18206 TSPY18P-201ENST00000441642 509 ntBASIC17.52■□□□□ 0.4
VCLP18206 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.52■□□□□ 0.4
VCLP18206 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.52■□□□□ 0.4
VCLP18206 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.52■□□□□ 0.4
VCLP18206 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
VCLP18206 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.52■□□□□ 0.4
VCLP18206 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.52■□□□□ 0.4
VCLP18206 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.52■□□□□ 0.4
VCLP18206 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.52■□□□□ 0.4
VCLP18206 AC114341.1-201ENST00000618070 349 ntBASIC17.52■□□□□ 0.4
VCLP18206 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
VCLP18206 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VCLP18206 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.52■□□□□ 0.4
VCLP18206 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.52■□□□□ 0.4
VCLP18206 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VCLP18206 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VCLP18206 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.52■□□□□ 0.39
VCLP18206 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
VCLP18206 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.52■□□□□ 0.39
VCLP18206 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.52■□□□□ 0.39
VCLP18206 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VCLP18206 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VCLP18206 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
VCLP18206 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VCLP18206 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
VCLP18206 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.52■□□□□ 0.39
VCLP18206 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.52■□□□□ 0.39
VCLP18206 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.51■□□□□ 0.39
VCLP18206 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VCLP18206 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.51■□□□□ 0.39
VCLP18206 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.51■□□□□ 0.39
VCLP18206 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.51■□□□□ 0.39
VCLP18206 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.51■□□□□ 0.39
VCLP18206 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.51■□□□□ 0.39
VCLP18206 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VCLP18206 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.51■□□□□ 0.39
VCLP18206 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.51■□□□□ 0.39
VCLP18206 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.51■□□□□ 0.39
VCLP18206 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.51■□□□□ 0.39
VCLP18206 KRT18P31-201ENST00000506277 1292 ntBASIC17.51■□□□□ 0.39
VCLP18206 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.51■□□□□ 0.39
VCLP18206 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms