Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.19□□□□□ -0.14
DEFA4P12838 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.19□□□□□ -0.14
DEFA4P12838 AC046158.3-201ENST00000624947 2558 ntBASIC14.19□□□□□ -0.14
DEFA4P12838 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA4P12838 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA4P12838 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DEFA4P12838 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DEFA4P12838 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.18□□□□□ -0.14
DEFA4P12838 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
DEFA4P12838 AL391807.1-203ENST00000604392 2365 ntBASIC14.18□□□□□ -0.14
DEFA4P12838 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
DEFA4P12838 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.18□□□□□ -0.14
DEFA4P12838 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.18□□□□□ -0.14
DEFA4P12838 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DEFA4P12838 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
DEFA4P12838 AC132938.6-201ENST00000623828 1655 ntBASIC14.18□□□□□ -0.14
DEFA4P12838 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.18□□□□□ -0.14
DEFA4P12838 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 AC005521.1-201ENST00000393351 872 ntBASIC14.18□□□□□ -0.14
DEFA4P12838 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.18□□□□□ -0.14
DEFA4P12838 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.18□□□□□ -0.14
DEFA4P12838 YBX1P2-201ENST00000489612 999 ntBASIC14.18□□□□□ -0.14
DEFA4P12838 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.18□□□□□ -0.14
DEFA4P12838 AC113404.2-201ENST00000507884 177 ntBASIC14.18□□□□□ -0.14
DEFA4P12838 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.18□□□□□ -0.14
DEFA4P12838 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.18□□□□□ -0.14
DEFA4P12838 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.18□□□□□ -0.14
DEFA4P12838 ZNF444P1-201ENST00000559497 298 ntBASIC14.18□□□□□ -0.14
DEFA4P12838 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
DEFA4P12838 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
DEFA4P12838 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
DEFA4P12838 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.18□□□□□ -0.14
DEFA4P12838 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.18□□□□□ -0.14
DEFA4P12838 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.18□□□□□ -0.14
DEFA4P12838 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DEFA4P12838 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
DEFA4P12838 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 AC106886.4-201ENST00000623557 2502 ntBASIC14.17□□□□□ -0.14
DEFA4P12838 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
DEFA4P12838 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
DEFA4P12838 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
DEFA4P12838 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
DEFA4P12838 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.17□□□□□ -0.14
DEFA4P12838 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.17□□□□□ -0.14
DEFA4P12838 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
DEFA4P12838 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
DEFA4P12838 AC126755.1-201ENST00000525846 6405 ntBASIC14.17□□□□□ -0.14
DEFA4P12838 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
DEFA4P12838 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 STARP1-201ENST00000397973 869 ntBASIC14.17□□□□□ -0.14
DEFA4P12838 AC211429.1-201ENST00000415277 523 ntBASIC14.17□□□□□ -0.14
DEFA4P12838 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 HOMER2P1-201ENST00000455653 964 ntBASIC14.17□□□□□ -0.14
DEFA4P12838 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.17□□□□□ -0.14
DEFA4P12838 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
DEFA4P12838 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
DEFA4P12838 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.17□□□□□ -0.14
DEFA4P12838 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 KRT89P-201ENST00000620027 1478 ntBASIC14.17□□□□□ -0.14
DEFA4P12838 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
DEFA4P12838 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DEFA4P12838 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms