Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHAP12694 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHAP12694 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHAP12694 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHAP12694 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHAP12694 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHAP12694 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
BCKDHAP12694 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.63■□□□□ 0.25
BCKDHAP12694 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.62■□□□□ 0.25
BCKDHAP12694 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.62■□□□□ 0.25
BCKDHAP12694 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.62■□□□□ 0.25
BCKDHAP12694 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.62■□□□□ 0.25
BCKDHAP12694 AL118508.1-201ENST00000613502 2345 ntBASIC16.62■□□□□ 0.25
BCKDHAP12694 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.62■□□□□ 0.25
BCKDHAP12694 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.62■□□□□ 0.25
BCKDHAP12694 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.62■□□□□ 0.25
BCKDHAP12694 TMPOP1-202ENST00000424642 1267 ntBASIC16.62■□□□□ 0.25
BCKDHAP12694 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.62■□□□□ 0.25
BCKDHAP12694 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.62■□□□□ 0.25
BCKDHAP12694 AC111152.3-201ENST00000569699 673 ntBASIC16.62■□□□□ 0.25
BCKDHAP12694 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.62■□□□□ 0.25
BCKDHAP12694 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.62■□□□□ 0.25
BCKDHAP12694 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.62■□□□□ 0.25
BCKDHAP12694 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
BCKDHAP12694 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
BCKDHAP12694 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.62■□□□□ 0.25
BCKDHAP12694 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
BCKDHAP12694 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
BCKDHAP12694 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
BCKDHAP12694 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHAP12694 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
BCKDHAP12694 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.61■□□□□ 0.25
BCKDHAP12694 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHAP12694 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHAP12694 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
BCKDHAP12694 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
BCKDHAP12694 STK25P1-201ENST00000585406 838 ntBASIC16.61■□□□□ 0.25
BCKDHAP12694 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.61■□□□□ 0.25
BCKDHAP12694 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHAP12694 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHAP12694 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
BCKDHAP12694 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHAP12694 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHAP12694 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
BCKDHAP12694 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
BCKDHAP12694 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHAP12694 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHAP12694 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHAP12694 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHAP12694 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BCKDHAP12694 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.6■□□□□ 0.25
BCKDHAP12694 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHAP12694 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BCKDHAP12694 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHAP12694 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.6■□□□□ 0.25
BCKDHAP12694 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.6■□□□□ 0.25
BCKDHAP12694 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
BCKDHAP12694 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHAP12694 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHAP12694 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHAP12694 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHAP12694 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHAP12694 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHAP12694 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms