Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 FLJ13224-201ENST00000313737 1514 ntBASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 GPR89P-201ENST00000407924 1495 ntBASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 AC010327.4-202ENST00000591484 748 ntBASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 AL691403.2-201ENST00000618460 490 ntBASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 AL805961.1-202ENST00000641562 540 ntBASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 FZD10-202ENST00000539839 3282 ntBASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40ALP0C0E4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 REXO1L9P-201ENST00000604264 2108 ntBASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 VN2R19P-201ENST00000442399 1052 ntBASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 AC108073.2-201ENST00000464002 357 ntBASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 AC092183.1-201ENST00000469884 875 ntBASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 AC112482.1-201ENST00000492080 688 ntBASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40ALP0C0E4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms