Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXC6P09630 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 REXO1L9P-201ENST00000604264 2108 ntBASIC19.51■□□□□ 0.71
HOXC6P09630 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXC6P09630 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
HOXC6P09630 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.51■□□□□ 0.71
HOXC6P09630 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXC6P09630 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXC6P09630 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXC6P09630 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 Z92544.3-201ENST00000624747 417 ntBASIC19.51■□□□□ 0.71
HOXC6P09630 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.51■□□□□ 0.71
HOXC6P09630 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HOXC6P09630 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HOXC6P09630 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXC6P09630 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXC6P09630 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
HOXC6P09630 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXC6P09630 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HOXC6P09630 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXC6P09630 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
HOXC6P09630 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 AC135050.7-201ENST00000624508 2218 ntBASIC19.5■□□□□ 0.71
HOXC6P09630 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.5■□□□□ 0.71
HOXC6P09630 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.5■□□□□ 0.71
HOXC6P09630 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.5■□□□□ 0.71
HOXC6P09630 AC107918.2-201ENST00000530817 355 ntBASIC19.5■□□□□ 0.71
HOXC6P09630 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.5■□□□□ 0.71
HOXC6P09630 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.5■□□□□ 0.71
HOXC6P09630 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
HOXC6P09630 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC6P09630 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HOXC6P09630 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXC6P09630 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXC6P09630 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.49■□□□□ 0.71
HOXC6P09630 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.49■□□□□ 0.71
HOXC6P09630 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXC6P09630 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
HOXC6P09630 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.49■□□□□ 0.71
HOXC6P09630 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXC6P09630 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.49■□□□□ 0.71
HOXC6P09630 SPDYE11-202ENST00000450699 704 ntBASIC19.49■□□□□ 0.71
HOXC6P09630 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXC6P09630 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HOXC6P09630 RN7SL589P-201ENST00000481268 310 ntBASIC19.49■□□□□ 0.71
HOXC6P09630 AC069335.1-201ENST00000489972 472 ntBASIC19.49■□□□□ 0.71
HOXC6P09630 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.49■□□□□ 0.71
HOXC6P09630 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.49■□□□□ 0.71
HOXC6P09630 DUX4L27-201ENST00000554796 1261 ntBASIC19.49■□□□□ 0.71
HOXC6P09630 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.49■□□□□ 0.71
HOXC6P09630 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.49■□□□□ 0.71
HOXC6P09630 AC051619.7-201ENST00000568314 623 ntBASIC19.49■□□□□ 0.71
HOXC6P09630 SPDYE9P-201ENST00000570642 692 ntBASIC19.49■□□□□ 0.71
HOXC6P09630 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.49■□□□□ 0.71
HOXC6P09630 SPDYE10P-202ENST00000612005 668 ntBASIC19.49■□□□□ 0.71
HOXC6P09630 SPDYE8P-202ENST00000612377 668 ntBASIC19.49■□□□□ 0.71
HOXC6P09630 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 AL354751.1-201ENST00000412768 1863 ntBASIC19.49■□□□□ 0.71
HOXC6P09630 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXC6P09630 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
HOXC6P09630 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXC6P09630 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXC6P09630 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.49■□□□□ 0.71
HOXC6P09630 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC6P09630 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms