Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CAPN1P07384 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.15■□□□□ 0.34
CAPN1P07384 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.15■□□□□ 0.34
CAPN1P07384 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.15■□□□□ 0.34
CAPN1P07384 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.15■□□□□ 0.34
CAPN1P07384 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.15■□□□□ 0.34
CAPN1P07384 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.15■□□□□ 0.34
CAPN1P07384 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.15■□□□□ 0.34
CAPN1P07384 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 NSUN5P1-202ENST00000421140 1535 ntBASIC17.15■□□□□ 0.34
CAPN1P07384 NSUN5P2-203ENST00000457352 1529 ntBASIC17.15■□□□□ 0.34
CAPN1P07384 BX276092.7-203ENST00000637198 1536 ntBASIC17.15■□□□□ 0.34
CAPN1P07384 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CAPN1P07384 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CAPN1P07384 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CAPN1P07384 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CAPN1P07384 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.14■□□□□ 0.34
CAPN1P07384 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CAPN1P07384 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN1P07384 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN1P07384 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
CAPN1P07384 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CAPN1P07384 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN1P07384 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN1P07384 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN1P07384 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CAPN1P07384 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN1P07384 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN1P07384 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CAPN1P07384 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CAPN1P07384 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN1P07384 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN1P07384 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.14■□□□□ 0.33
CAPN1P07384 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN1P07384 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN1P07384 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN1P07384 AL031008.1-201ENST00000619963 541 ntBASIC17.14■□□□□ 0.33
CAPN1P07384 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN1P07384 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CAPN1P07384 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN1P07384 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN1P07384 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN1P07384 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN1P07384 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CAPN1P07384 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN1P07384 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CAPN1P07384 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CAPN1P07384 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CAPN1P07384 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CAPN1P07384 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 AC022211.2-201ENST00000585075 2527 ntBASIC17.13■□□□□ 0.33
CAPN1P07384 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN1P07384 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN1P07384 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN1P07384 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN1P07384 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN1P07384 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CAPN1P07384 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CAPN1P07384 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CAPN1P07384 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN1P07384 MTCL1P1-201ENST00000446207 792 ntBASIC17.13■□□□□ 0.33
CAPN1P07384 AC068472.1-201ENST00000474589 881 ntBASIC17.13■□□□□ 0.33
CAPN1P07384 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CAPN1P07384 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN1P07384 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN1P07384 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.13■□□□□ 0.33
CAPN1P07384 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPN1P07384 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.13■□□□□ 0.33
CAPN1P07384 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN1P07384 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN1P07384 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN1P07384 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPN1P07384 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CAPN1P07384 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms