Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL5A2P05997 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
COL5A2P05997 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL5A2P05997 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL5A2P05997 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.6■■□□□ 1.21
COL5A2P05997 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL5A2P05997 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL5A2P05997 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC22.6■■□□□ 1.21
COL5A2P05997 MTRF1LP2-201ENST00000506027 1122 ntBASIC22.6■■□□□ 1.21
COL5A2P05997 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL5A2P05997 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL5A2P05997 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC22.6■■□□□ 1.21
COL5A2P05997 AC073592.8-201ENST00000624126 511 ntBASIC22.6■■□□□ 1.21
COL5A2P05997 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC22.6■■□□□ 1.21
COL5A2P05997 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL5A2P05997 AL353732.1-201ENST00000569618 1459 ntBASIC22.6■■□□□ 1.21
COL5A2P05997 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL5A2P05997 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL5A2P05997 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.59■■□□□ 1.21
COL5A2P05997 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL5A2P05997 SLC22A20-204ENST00000530038 1673 ntBASIC22.59■■□□□ 1.21
COL5A2P05997 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL5A2P05997 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL5A2P05997 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL5A2P05997 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC22.59■■□□□ 1.21
COL5A2P05997 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL5A2P05997 NOP2-220ENST00000545915 630 ntTSL 2 BASIC22.59■■□□□ 1.21
COL5A2P05997 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC22.59■■□□□ 1.21
COL5A2P05997 MIR4453-201ENST00000584019 89 ntBASIC22.59■■□□□ 1.21
COL5A2P05997 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC22.59■■□□□ 1.21
COL5A2P05997 COQ4-205ENST00000609948 956 ntTSL 2 BASIC22.59■■□□□ 1.21
COL5A2P05997 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
COL5A2P05997 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL5A2P05997 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL5A2P05997 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL5A2P05997 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
COL5A2P05997 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
COL5A2P05997 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
COL5A2P05997 LINC00304-203ENST00000565008 1864 ntBASIC22.58■■□□□ 1.21
COL5A2P05997 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
COL5A2P05997 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
COL5A2P05997 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL5A2P05997 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
COL5A2P05997 PIN1P1-201ENST00000412108 996 ntBASIC22.58■■□□□ 1.2
COL5A2P05997 HCG4-201ENST00000418983 998 ntBASIC22.58■■□□□ 1.2
COL5A2P05997 NME2P1-201ENST00000426182 414 ntBASIC22.58■■□□□ 1.2
COL5A2P05997 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
COL5A2P05997 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC22.58■■□□□ 1.2
COL5A2P05997 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC22.58■■□□□ 1.2
COL5A2P05997 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL5A2P05997 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC22.58■■□□□ 1.2
COL5A2P05997 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
COL5A2P05997 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC22.58■■□□□ 1.2
COL5A2P05997 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL5A2P05997 AC016027.1-202ENST00000607927 1699 ntBASIC22.58■■□□□ 1.2
COL5A2P05997 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL5A2P05997 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
COL5A2P05997 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL5A2P05997 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC22.57■■□□□ 1.2
COL5A2P05997 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC22.57■■□□□ 1.2
COL5A2P05997 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL5A2P05997 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC22.57■■□□□ 1.2
COL5A2P05997 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
COL5A2P05997 AC142381.1-201ENST00000426099 345 ntBASIC22.57■■□□□ 1.2
COL5A2P05997 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC22.57■■□□□ 1.2
COL5A2P05997 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
COL5A2P05997 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
COL5A2P05997 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC22.57■■□□□ 1.2
COL5A2P05997 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL5A2P05997 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC22.57■■□□□ 1.2
COL5A2P05997 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
COL5A2P05997 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL5A2P05997 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL5A2P05997 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL5A2P05997 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL5A2P05997 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL5A2P05997 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL5A2P05997 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC22.57■■□□□ 1.2
COL5A2P05997 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
COL5A2P05997 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.57■■□□□ 1.2
COL5A2P05997 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL5A2P05997 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.56■■□□□ 1.2
COL5A2P05997 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.56■■□□□ 1.2
COL5A2P05997 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL5A2P05997 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL5A2P05997 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL5A2P05997 HLA-V-201ENST00000429037 534 ntBASIC22.56■■□□□ 1.2
COL5A2P05997 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC22.56■■□□□ 1.2
COL5A2P05997 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC22.56■■□□□ 1.2
COL5A2P05997 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC22.56■■□□□ 1.2
COL5A2P05997 SPTLC1P1-201ENST00000447199 261 ntBASIC22.56■■□□□ 1.2
COL5A2P05997 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL5A2P05997 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
COL5A2P05997 AL008721.1-201ENST00000609964 604 ntBASIC22.56■■□□□ 1.2
COL5A2P05997 AL590560.3-201ENST00000623350 461 ntBASIC22.56■■□□□ 1.2
COL5A2P05997 LINC01451-201ENST00000623792 534 ntBASIC22.56■■□□□ 1.2
COL5A2P05997 AC022144.1-201ENST00000602255 1580 ntBASIC22.56■■□□□ 1.2
COL5A2P05997 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL5A2P05997 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.56■■□□□ 1.2
COL5A2P05997 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms