Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.8■□□□□ 0.92
POLR3DP05423 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
POLR3DP05423 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR3DP05423 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.79■□□□□ 0.92
POLR3DP05423 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
POLR3DP05423 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR3DP05423 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR3DP05423 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.79■□□□□ 0.92
POLR3DP05423 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.79■□□□□ 0.92
POLR3DP05423 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR3DP05423 MYCLP1-201ENST00000372451 1075 ntBASIC20.79■□□□□ 0.92
POLR3DP05423 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.79■□□□□ 0.92
POLR3DP05423 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.79■□□□□ 0.92
POLR3DP05423 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.79■□□□□ 0.92
POLR3DP05423 POLD2P1-201ENST00000511220 997 ntBASIC20.79■□□□□ 0.92
POLR3DP05423 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.79■□□□□ 0.92
POLR3DP05423 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
POLR3DP05423 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.79■□□□□ 0.92
POLR3DP05423 LTB4R2-202ENST00000528054 3092 ntBASIC20.79■□□□□ 0.92
POLR3DP05423 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.79■□□□□ 0.92
POLR3DP05423 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
POLR3DP05423 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.79■□□□□ 0.92
POLR3DP05423 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
POLR3DP05423 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
POLR3DP05423 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
POLR3DP05423 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR3DP05423 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR3DP05423 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR3DP05423 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR3DP05423 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR3DP05423 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR3DP05423 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR3DP05423 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR3DP05423 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR3DP05423 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR3DP05423 AC009336.1-201ENST00000608941 1553 ntBASIC20.78■□□□□ 0.92
POLR3DP05423 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
POLR3DP05423 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.78■□□□□ 0.92
POLR3DP05423 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
POLR3DP05423 KRT18P27-201ENST00000427733 1299 ntBASIC20.78■□□□□ 0.92
POLR3DP05423 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.78■□□□□ 0.92
POLR3DP05423 UNC93B6-202ENST00000528242 690 ntBASIC20.78■□□□□ 0.92
POLR3DP05423 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
POLR3DP05423 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.78■□□□□ 0.92
POLR3DP05423 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
POLR3DP05423 TERC-201ENST00000602385 541 ntBASIC20.78■□□□□ 0.92
POLR3DP05423 Z83851.2-201ENST00000609564 659 ntBASIC20.78■□□□□ 0.92
POLR3DP05423 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR3DP05423 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.78■□□□□ 0.92
POLR3DP05423 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR3DP05423 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR3DP05423 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
POLR3DP05423 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.78■□□□□ 0.92
POLR3DP05423 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.78■□□□□ 0.92
POLR3DP05423 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
POLR3DP05423 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR3DP05423 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.77■□□□□ 0.92
POLR3DP05423 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
POLR3DP05423 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.77■□□□□ 0.92
POLR3DP05423 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR3DP05423 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR3DP05423 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.77■□□□□ 0.92
POLR3DP05423 AC006116.8-202ENST00000587620 1550 ntBASIC20.77■□□□□ 0.92
POLR3DP05423 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
POLR3DP05423 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR3DP05423 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.77■□□□□ 0.92
POLR3DP05423 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.77■□□□□ 0.92
POLR3DP05423 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.77■□□□□ 0.92
POLR3DP05423 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.77■□□□□ 0.92
POLR3DP05423 AC034105.1-201ENST00000563488 319 ntBASIC20.77■□□□□ 0.92
POLR3DP05423 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR3DP05423 AC004706.3-202ENST00000621574 984 ntBASIC20.77■□□□□ 0.92
POLR3DP05423 AC005593.1-201ENST00000624894 515 ntBASIC20.77■□□□□ 0.92
POLR3DP05423 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.77■□□□□ 0.92
POLR3DP05423 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
POLR3DP05423 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR3DP05423 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
POLR3DP05423 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR3DP05423 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR3DP05423 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
POLR3DP05423 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
POLR3DP05423 NCF1C-201ENST00000438382 1427 ntBASIC20.77■□□□□ 0.91
POLR3DP05423 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
POLR3DP05423 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
POLR3DP05423 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR3DP05423 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR3DP05423 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR3DP05423 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR3DP05423 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR3DP05423 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR3DP05423 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR3DP05423 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
POLR3DP05423 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR3DP05423 AC073621.1-201ENST00000392730 636 ntBASIC20.76■□□□□ 0.91
POLR3DP05423 AC005104.2-201ENST00000427818 678 ntBASIC20.76■□□□□ 0.91
POLR3DP05423 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
POLR3DP05423 AC136632.2-201ENST00000512891 861 ntBASIC20.76■□□□□ 0.91
POLR3DP05423 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.76■□□□□ 0.91
POLR3DP05423 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms