Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC079776.4-201ENST00000511039 504 ntBASIC20.88■□□□□ 0.93
APPP05067 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.88■□□□□ 0.93
APPP05067 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.88■□□□□ 0.93
APPP05067 AL139327.4-201ENST00000612362 153 ntBASIC20.88■□□□□ 0.93
APPP05067 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.88■□□□□ 0.93
APPP05067 AC073592.4-201ENST00000623827 446 ntBASIC20.88■□□□□ 0.93
APPP05067 AL022326.1-202ENST00000641533 845 ntBASIC20.88■□□□□ 0.93
APPP05067 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APPP05067 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.88■□□□□ 0.93
APPP05067 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APPP05067 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.88■□□□□ 0.93
APPP05067 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APPP05067 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.88■□□□□ 0.93
APPP05067 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
APPP05067 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
APPP05067 SIGLEC16-201ENST00000599858 1437 ntBASIC20.87■□□□□ 0.93
APPP05067 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APPP05067 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
APPP05067 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
APPP05067 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APPP05067 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.87■□□□□ 0.93
APPP05067 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APPP05067 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.87■□□□□ 0.93
APPP05067 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
APPP05067 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.87■□□□□ 0.93
APPP05067 RPS2P1-201ENST00000434010 821 ntBASIC20.87■□□□□ 0.93
APPP05067 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
APPP05067 AL662844.1-201ENST00000546340 181 ntBASIC20.87■□□□□ 0.93
APPP05067 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.87■□□□□ 0.93
APPP05067 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.87■□□□□ 0.93
APPP05067 SLC25A6P4-201ENST00000586535 553 ntBASIC20.87■□□□□ 0.93
APPP05067 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.87■□□□□ 0.93
APPP05067 AL773604.1-201ENST00000617417 272 ntBASIC20.87■□□□□ 0.93
APPP05067 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
APPP05067 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APPP05067 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APPP05067 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
APPP05067 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
APPP05067 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
APPP05067 AC011270.2-201ENST00000624293 2550 ntBASIC20.87■□□□□ 0.93
APPP05067 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
APPP05067 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.86■□□□□ 0.93
APPP05067 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APPP05067 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APPP05067 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.86■□□□□ 0.93
APPP05067 LYSMD4-203ENST00000378904 2122 ntBASIC20.86■□□□□ 0.93
APPP05067 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
APPP05067 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APPP05067 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APPP05067 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
APPP05067 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APPP05067 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APPP05067 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APPP05067 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
APPP05067 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
APPP05067 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APPP05067 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
APPP05067 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.86■□□□□ 0.93
APPP05067 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APPP05067 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
APPP05067 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.86■□□□□ 0.93
APPP05067 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
APPP05067 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.86■□□□□ 0.93
APPP05067 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 AC046185.3-201ENST00000623228 1824 ntBASIC20.85■□□□□ 0.93
APPP05067 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
APPP05067 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.85■□□□□ 0.93
APPP05067 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
APPP05067 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
APPP05067 HNRNPDP1-201ENST00000439535 754 ntBASIC20.85■□□□□ 0.93
APPP05067 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.85■□□□□ 0.93
APPP05067 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.85■□□□□ 0.93
APPP05067 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.85■□□□□ 0.93
APPP05067 AC025062.2-201ENST00000605477 670 ntBASIC20.85■□□□□ 0.93
APPP05067 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
APPP05067 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
APPP05067 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.85■□□□□ 0.93
APPP05067 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
APPP05067 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
APPP05067 AC005332.8-201ENST00000622750 2735 ntBASIC20.84■□□□□ 0.93
APPP05067 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.84■□□□□ 0.93
APPP05067 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.84■□□□□ 0.93
APPP05067 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms