Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 MGST3-204ENST00000367888 778 ntTSL 3 BASIC20.03■□□□□ 0.8
MYCNP04198 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MYCNP04198 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MYCNP04198 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.03■□□□□ 0.8
MYCNP04198 AC108751.1-201ENST00000490852 363 ntBASIC20.03■□□□□ 0.8
MYCNP04198 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
MYCNP04198 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.03■□□□□ 0.8
MYCNP04198 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.03■□□□□ 0.8
MYCNP04198 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.03■□□□□ 0.8
MYCNP04198 AC098617.1-207ENST00000594591 810 ntTSL 5 BASIC20.03■□□□□ 0.8
MYCNP04198 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC20.03■□□□□ 0.8
MYCNP04198 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.03■□□□□ 0.8
MYCNP04198 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MYCNP04198 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MYCNP04198 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MYCNP04198 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MYCNP04198 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MYCNP04198 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.02■□□□□ 0.8
MYCNP04198 AC008894.3-201ENST00000624324 3103 ntBASIC20.02■□□□□ 0.8
MYCNP04198 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MYCNP04198 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC20.02■□□□□ 0.8
MYCNP04198 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.02■□□□□ 0.8
MYCNP04198 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.02■□□□□ 0.8
MYCNP04198 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MYCNP04198 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC20.02■□□□□ 0.8
MYCNP04198 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC20.02■□□□□ 0.8
MYCNP04198 NPM1P10-201ENST00000398310 865 ntBASIC20.02■□□□□ 0.8
MYCNP04198 ACP1-203ENST00000405233 1149 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC20.02■□□□□ 0.8
MYCNP04198 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.02■□□□□ 0.8
MYCNP04198 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 RNU6-415P-201ENST00000516252 97 ntBASIC20.02■□□□□ 0.8
MYCNP04198 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC20.02■□□□□ 0.8
MYCNP04198 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.02■□□□□ 0.8
MYCNP04198 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.02■□□□□ 0.8
MYCNP04198 AP000867.4-201ENST00000641616 219 ntBASIC20.02■□□□□ 0.8
MYCNP04198 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MYCNP04198 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.02■□□□□ 0.8
MYCNP04198 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
MYCNP04198 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
MYCNP04198 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MYCNP04198 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MYCNP04198 RNF148-201ENST00000434824 1304 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
MYCNP04198 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MYCNP04198 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
MYCNP04198 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.01■□□□□ 0.79
MYCNP04198 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
MYCNP04198 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
MYCNP04198 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
MYCNP04198 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.01■□□□□ 0.79
MYCNP04198 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 TCEAL1-202ENST00000372625 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.01■□□□□ 0.79
MYCNP04198 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.01■□□□□ 0.79
MYCNP04198 AC007967.3-201ENST00000434308 558 ntBASIC20.01■□□□□ 0.79
MYCNP04198 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.01■□□□□ 0.79
MYCNP04198 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.01■□□□□ 0.79
MYCNP04198 AL109741.3-201ENST00000561748 592 ntBASIC20.01■□□□□ 0.79
MYCNP04198 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.01■□□□□ 0.79
MYCNP04198 ADAL-204ENST00000562188 1228 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
MYCNP04198 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.01■□□□□ 0.79
MYCNP04198 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.01■□□□□ 0.79
MYCNP04198 AL022326.1-202ENST00000641533 845 ntBASIC20.01■□□□□ 0.79
MYCNP04198 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.01■□□□□ 0.79
MYCNP04198 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MYCNP04198 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.01■□□□□ 0.79
MYCNP04198 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.01■□□□□ 0.79
MYCNP04198 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
MYCNP04198 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.01■□□□□ 0.79
MYCNP04198 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.01■□□□□ 0.79
MYCNP04198 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20■□□□□ 0.79
MYCNP04198 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MYCNP04198 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms