Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGCRP04035 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGCRP04035 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGCRP04035 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGCRP04035 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGCRP04035 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCRP04035 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCRP04035 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCRP04035 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGCRP04035 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCRP04035 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCRP04035 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCRP04035 MIR661-201ENST00000384842 89 ntBASIC19.51■□□□□ 0.71
HMGCRP04035 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGCRP04035 TFAMP1-201ENST00000412727 736 ntBASIC19.51■□□□□ 0.71
HMGCRP04035 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.51■□□□□ 0.71
HMGCRP04035 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCRP04035 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGCRP04035 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.51■□□□□ 0.71
HMGCRP04035 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
HMGCRP04035 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.51■□□□□ 0.71
HMGCRP04035 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCRP04035 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.51■□□□□ 0.71
HMGCRP04035 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCRP04035 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
HMGCRP04035 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGCRP04035 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.51■□□□□ 0.71
HMGCRP04035 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCRP04035 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
HMGCRP04035 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCRP04035 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCRP04035 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCRP04035 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCRP04035 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCRP04035 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCRP04035 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
HMGCRP04035 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.5■□□□□ 0.71
HMGCRP04035 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.5■□□□□ 0.71
HMGCRP04035 AL096828.2-201ENST00000567259 1965 ntBASIC19.5■□□□□ 0.71
HMGCRP04035 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCRP04035 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCRP04035 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCRP04035 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCRP04035 AC107890.1-201ENST00000422478 521 ntBASIC19.5■□□□□ 0.71
HMGCRP04035 FAM207CP-201ENST00000443486 507 ntBASIC19.5■□□□□ 0.71
HMGCRP04035 GAPDHP21-201ENST00000450301 1010 ntBASIC19.5■□□□□ 0.71
HMGCRP04035 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.5■□□□□ 0.71
HMGCRP04035 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.5■□□□□ 0.71
HMGCRP04035 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCRP04035 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.5■□□□□ 0.71
HMGCRP04035 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCRP04035 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCRP04035 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HMGCRP04035 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.5■□□□□ 0.71
HMGCRP04035 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HMGCRP04035 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCRP04035 AC129492.6-201ENST00000611383 1305 ntBASIC19.5■□□□□ 0.71
HMGCRP04035 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
HMGCRP04035 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCRP04035 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCRP04035 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCRP04035 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCRP04035 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.49■□□□□ 0.71
HMGCRP04035 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.49■□□□□ 0.71
HMGCRP04035 AC125807.1-201ENST00000483097 614 ntBASIC19.49■□□□□ 0.71
HMGCRP04035 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.49■□□□□ 0.71
HMGCRP04035 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGCRP04035 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.49■□□□□ 0.71
HMGCRP04035 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.49■□□□□ 0.71
HMGCRP04035 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.49■□□□□ 0.71
HMGCRP04035 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.49■□□□□ 0.71
HMGCRP04035 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.49■□□□□ 0.71
HMGCRP04035 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HMGCRP04035 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGCRP04035 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
HMGCRP04035 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCRP04035 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCRP04035 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGCRP04035 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCRP04035 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGCRP04035 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCRP04035 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGCRP04035 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms