Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBC1P01850 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBC1P01850 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBC1P01850 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBC1P01850 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBC1P01850 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBC1P01850 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.41■□□□□ 0.38
TRBC1P01850 ACTG1P4-201ENST00000425123 1122 ntBASIC17.41■□□□□ 0.38
TRBC1P01850 RPS2P1-201ENST00000434010 821 ntBASIC17.41■□□□□ 0.38
TRBC1P01850 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRBC1P01850 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.41■□□□□ 0.38
TRBC1P01850 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBC1P01850 AL773604.1-201ENST00000617417 272 ntBASIC17.41■□□□□ 0.38
TRBC1P01850 AC107918.4-202ENST00000641623 219 ntBASIC17.41■□□□□ 0.38
TRBC1P01850 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRBC1P01850 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBC1P01850 CROCCP2-202ENST00000412962 2773 ntBASIC17.41■□□□□ 0.38
TRBC1P01850 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBC1P01850 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBC1P01850 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRBC1P01850 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.41■□□□□ 0.38
TRBC1P01850 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBC1P01850 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBC1P01850 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBC1P01850 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBC1P01850 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBC1P01850 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBC1P01850 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRBC1P01850 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRBC1P01850 LAGE3P1-201ENST00000425356 484 ntBASIC17.4■□□□□ 0.38
TRBC1P01850 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 HNRNPDP1-201ENST00000439535 754 ntBASIC17.4■□□□□ 0.38
TRBC1P01850 OR7E14P-202ENST00000530490 1290 ntBASIC17.4■□□□□ 0.38
TRBC1P01850 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBC1P01850 AL662844.1-201ENST00000546340 181 ntBASIC17.4■□□□□ 0.38
TRBC1P01850 AC139887.3-201ENST00000568585 713 ntBASIC17.4■□□□□ 0.38
TRBC1P01850 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBC1P01850 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBC1P01850 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRBC1P01850 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TRBC1P01850 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBC1P01850 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBC1P01850 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBC1P01850 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRBC1P01850 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.39■□□□□ 0.38
TRBC1P01850 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRBC1P01850 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBC1P01850 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBC1P01850 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRBC1P01850 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBC1P01850 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRBC1P01850 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRBC1P01850 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.39■□□□□ 0.37
TRBC1P01850 AC026396.1-201ENST00000419388 421 ntBASIC17.39■□□□□ 0.37
TRBC1P01850 LINC00982-205ENST00000420957 435 ntBASIC17.39■□□□□ 0.37
TRBC1P01850 FDX1P1-201ENST00000449115 551 ntBASIC17.39■□□□□ 0.37
TRBC1P01850 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
TRBC1P01850 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBC1P01850 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.39■□□□□ 0.37
TRBC1P01850 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBC1P01850 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBC1P01850 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.39■□□□□ 0.37
TRBC1P01850 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.39■□□□□ 0.37
TRBC1P01850 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRBC1P01850 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBC1P01850 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
TRBC1P01850 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBC1P01850 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBC1P01850 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms