Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUBNO60494 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.78□□□□□ -0.2
CUBNO60494 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUBNO60494 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CUBNO60494 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUBNO60494 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUBNO60494 REXO1L11P-201ENST00000620964 1927 ntBASIC13.78□□□□□ -0.2
CUBNO60494 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUBNO60494 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.78□□□□□ -0.2
CUBNO60494 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.78□□□□□ -0.2
CUBNO60494 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.78□□□□□ -0.2
CUBNO60494 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.78□□□□□ -0.2
CUBNO60494 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CUBNO60494 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUBNO60494 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CUBNO60494 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUBNO60494 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CUBNO60494 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CUBNO60494 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CUBNO60494 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CUBNO60494 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.77□□□□□ -0.2
CUBNO60494 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.77□□□□□ -0.2
CUBNO60494 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.77□□□□□ -0.2
CUBNO60494 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CUBNO60494 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CUBNO60494 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CUBNO60494 AC002056.1-201ENST00000395613 760 ntBASIC13.77□□□□□ -0.21
CUBNO60494 FAM185BP-201ENST00000443595 716 ntBASIC13.77□□□□□ -0.21
CUBNO60494 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUBNO60494 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.77□□□□□ -0.21
CUBNO60494 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.77□□□□□ -0.21
CUBNO60494 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.77□□□□□ -0.21
CUBNO60494 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CUBNO60494 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CUBNO60494 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.77□□□□□ -0.21
CUBNO60494 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CUBNO60494 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUBNO60494 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUBNO60494 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.77□□□□□ -0.21
CUBNO60494 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.77□□□□□ -0.21
CUBNO60494 RBPMS2P1-201ENST00000437762 623 ntBASIC13.77□□□□□ -0.21
CUBNO60494 STK19B-204ENST00000512515 211 ntBASIC13.77□□□□□ -0.21
CUBNO60494 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.77□□□□□ -0.21
CUBNO60494 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.77□□□□□ -0.21
CUBNO60494 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CUBNO60494 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUBNO60494 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.76□□□□□ -0.21
CUBNO60494 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.76□□□□□ -0.21
CUBNO60494 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CUBNO60494 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 AL138828.2-201ENST00000615812 383 ntBASIC13.76□□□□□ -0.21
CUBNO60494 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CUBNO60494 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.76□□□□□ -0.21
CUBNO60494 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.76□□□□□ -0.21
CUBNO60494 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.76□□□□□ -0.21
CUBNO60494 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.76□□□□□ -0.21
CUBNO60494 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.76□□□□□ -0.21
CUBNO60494 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CUBNO60494 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CUBNO60494 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CUBNO60494 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.76□□□□□ -0.21
CUBNO60494 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.76□□□□□ -0.21
CUBNO60494 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.76□□□□□ -0.21
CUBNO60494 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.76□□□□□ -0.21
CUBNO60494 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.76□□□□□ -0.21
CUBNO60494 AC084346.2-201ENST00000607097 949 ntBASIC13.76□□□□□ -0.21
CUBNO60494 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.76□□□□□ -0.21
CUBNO60494 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUBNO60494 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CUBNO60494 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.75□□□□□ -0.21
CUBNO60494 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUBNO60494 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CUBNO60494 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUBNO60494 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CUBNO60494 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CUBNO60494 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUBNO60494 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.75□□□□□ -0.21
CUBNO60494 AC009477.1-201ENST00000452936 217 ntBASIC13.75□□□□□ -0.21
CUBNO60494 AC026150.2-201ENST00000564693 1156 ntBASIC13.75□□□□□ -0.21
CUBNO60494 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.75□□□□□ -0.21
CUBNO60494 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CUBNO60494 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.75□□□□□ -0.21
CUBNO60494 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CUBNO60494 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.75□□□□□ -0.21
CUBNO60494 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms