Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PCDH7O60245 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH7O60245 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH7O60245 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCDH7O60245 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH7O60245 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCDH7O60245 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDH7O60245 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 LINC00265-3P-201ENST00000447588 903 ntBASIC16.62■□□□□ 0.25
PCDH7O60245 MINOS1P3-201ENST00000457048 203 ntBASIC16.62■□□□□ 0.25
PCDH7O60245 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDH7O60245 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PCDH7O60245 STK25P1-201ENST00000585406 838 ntBASIC16.62■□□□□ 0.25
PCDH7O60245 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDH7O60245 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PCDH7O60245 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCDH7O60245 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH7O60245 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH7O60245 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDH7O60245 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDH7O60245 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH7O60245 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.61■□□□□ 0.25
PCDH7O60245 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH7O60245 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH7O60245 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.61■□□□□ 0.25
PCDH7O60245 AC084018.2-201ENST00000613093 2607 ntBASIC16.61■□□□□ 0.25
PCDH7O60245 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH7O60245 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
PCDH7O60245 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH7O60245 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH7O60245 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDH7O60245 KRT17P6-201ENST00000453795 1220 ntBASIC16.61■□□□□ 0.25
PCDH7O60245 AC096582.2-201ENST00000510860 516 ntBASIC16.61■□□□□ 0.25
PCDH7O60245 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PCDH7O60245 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH7O60245 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH7O60245 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH7O60245 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDH7O60245 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH7O60245 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH7O60245 AC093525.9-201ENST00000624961 1746 ntBASIC16.61■□□□□ 0.25
PCDH7O60245 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH7O60245 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH7O60245 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH7O60245 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDH7O60245 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH7O60245 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDH7O60245 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH7O60245 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH7O60245 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH7O60245 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH7O60245 AL353593.2-201ENST00000602529 1483 ntBASIC16.61■□□□□ 0.25
PCDH7O60245 TP73-AS1-210ENST00000637775 1455 ntBASIC16.61■□□□□ 0.25
PCDH7O60245 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDH7O60245 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDH7O60245 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDH7O60245 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDH7O60245 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDH7O60245 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDH7O60245 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDH7O60245 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDH7O60245 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
PCDH7O60245 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDH7O60245 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDH7O60245 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDH7O60245 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.6■□□□□ 0.25
PCDH7O60245 AL358472.4-201ENST00000633140 710 ntBASIC16.6■□□□□ 0.25
PCDH7O60245 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDH7O60245 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms