Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
KDELR3O43731 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.6■□□□□ 0.41
KDELR3O43731 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.6■□□□□ 0.41
KDELR3O43731 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.6■□□□□ 0.41
KDELR3O43731 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
KDELR3O43731 SLC25A1P3-201ENST00000395415 828 ntBASIC17.6■□□□□ 0.41
KDELR3O43731 ELK2BP-201ENST00000415014 1224 ntBASIC17.6■□□□□ 0.41
KDELR3O43731 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.6■□□□□ 0.41
KDELR3O43731 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.6■□□□□ 0.41
KDELR3O43731 AC092910.1-201ENST00000482027 1129 ntBASIC17.6■□□□□ 0.41
KDELR3O43731 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.6■□□□□ 0.41
KDELR3O43731 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.6■□□□□ 0.41
KDELR3O43731 AC136632.2-201ENST00000512891 861 ntBASIC17.6■□□□□ 0.41
KDELR3O43731 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.6■□□□□ 0.41
KDELR3O43731 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.6■□□□□ 0.41
KDELR3O43731 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.6■□□□□ 0.41
KDELR3O43731 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.6■□□□□ 0.41
KDELR3O43731 MIR1199-201ENST00000621445 119 ntBASIC17.6■□□□□ 0.41
KDELR3O43731 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.6■□□□□ 0.41
KDELR3O43731 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
KDELR3O43731 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
KDELR3O43731 AC093525.9-201ENST00000624961 1746 ntBASIC17.6■□□□□ 0.41
KDELR3O43731 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
KDELR3O43731 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KDELR3O43731 AC141586.5-201ENST00000624546 2050 ntBASIC17.6■□□□□ 0.41
KDELR3O43731 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.6■□□□□ 0.41
KDELR3O43731 AC090340.1-201ENST00000620778 4980 ntBASIC17.59■□□□□ 0.41
KDELR3O43731 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.59■□□□□ 0.41
KDELR3O43731 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
KDELR3O43731 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
KDELR3O43731 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KDELR3O43731 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.59■□□□□ 0.41
KDELR3O43731 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.59■□□□□ 0.41
KDELR3O43731 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.59■□□□□ 0.41
KDELR3O43731 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
KDELR3O43731 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KDELR3O43731 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.59■□□□□ 0.41
KDELR3O43731 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.59■□□□□ 0.41
KDELR3O43731 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.59■□□□□ 0.41
KDELR3O43731 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.59■□□□□ 0.41
KDELR3O43731 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.59■□□□□ 0.41
KDELR3O43731 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.59■□□□□ 0.41
KDELR3O43731 PGM5P2-202ENST00000637225 1043 ntBASIC17.59■□□□□ 0.41
KDELR3O43731 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.59■□□□□ 0.41
KDELR3O43731 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.59■□□□□ 0.41
KDELR3O43731 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KDELR3O43731 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.59■□□□□ 0.41
KDELR3O43731 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
KDELR3O43731 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KDELR3O43731 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.59■□□□□ 0.41
KDELR3O43731 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
KDELR3O43731 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.58■□□□□ 0.41
KDELR3O43731 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KDELR3O43731 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
KDELR3O43731 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KDELR3O43731 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDELR3O43731 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDELR3O43731 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDELR3O43731 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.58■□□□□ 0.4
KDELR3O43731 PTCHD3P3-201ENST00000403073 906 ntBASIC17.58■□□□□ 0.4
KDELR3O43731 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.58■□□□□ 0.4
KDELR3O43731 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.58■□□□□ 0.4
KDELR3O43731 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.58■□□□□ 0.4
KDELR3O43731 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.58■□□□□ 0.4
KDELR3O43731 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDELR3O43731 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.58■□□□□ 0.4
KDELR3O43731 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KDELR3O43731 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.58■□□□□ 0.4
KDELR3O43731 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDELR3O43731 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDELR3O43731 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KDELR3O43731 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms