Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PCDHB17P-201ENST00000539533 2393 ntBASIC11.93□□□□□ -0.5
NDUFA1O15239 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.93□□□□□ -0.5
NDUFA1O15239 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC11.93□□□□□ -0.5
NDUFA1O15239 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC11.93□□□□□ -0.5
NDUFA1O15239 AL390955.1-201ENST00000428694 934 ntBASIC11.93□□□□□ -0.5
NDUFA1O15239 TSPY7P-201ENST00000431358 1114 ntBASIC11.93□□□□□ -0.5
NDUFA1O15239 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC11.93□□□□□ -0.5
NDUFA1O15239 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC11.93□□□□□ -0.5
NDUFA1O15239 DDX43P3-201ENST00000441064 443 ntBASIC11.93□□□□□ -0.5
NDUFA1O15239 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 EGLN1P1-201ENST00000531623 762 ntBASIC11.93□□□□□ -0.5
NDUFA1O15239 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC11.93□□□□□ -0.5
NDUFA1O15239 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC11.93□□□□□ -0.5
NDUFA1O15239 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC11.93□□□□□ -0.5
NDUFA1O15239 AC092865.7-201ENST00000641832 219 ntBASIC11.93□□□□□ -0.5
NDUFA1O15239 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.93□□□□□ -0.5
NDUFA1O15239 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
NDUFA1O15239 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC11.93□□□□□ -0.5
NDUFA1O15239 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.93□□□□□ -0.5
NDUFA1O15239 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
NDUFA1O15239 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFA1O15239 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
NDUFA1O15239 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.93□□□□□ -0.5
NDUFA1O15239 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
NDUFA1O15239 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFA1O15239 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
NDUFA1O15239 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFA1O15239 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NDUFA1O15239 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFA1O15239 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFA1O15239 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFA1O15239 CYP2T1P-202ENST00000641596 2535 ntBASIC11.92□□□□□ -0.5
NDUFA1O15239 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NDUFA1O15239 AC116353.5-201ENST00000638148 1699 ntBASIC11.92□□□□□ -0.5
NDUFA1O15239 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
NDUFA1O15239 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
NDUFA1O15239 TSPY14P-201ENST00000303979 915 ntBASIC11.92□□□□□ -0.5
NDUFA1O15239 PRR31-201ENST00000371629 978 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFA1O15239 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 AP000523.1-201ENST00000398242 1049 ntBASIC11.92□□□□□ -0.5
NDUFA1O15239 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC11.92□□□□□ -0.5
NDUFA1O15239 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFA1O15239 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC11.92□□□□□ -0.5
NDUFA1O15239 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.92□□□□□ -0.5
NDUFA1O15239 GPX4-207ENST00000589115 812 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFA1O15239 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC11.92□□□□□ -0.5
NDUFA1O15239 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 GLDC-219ENST00000640208 420 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFA1O15239 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFA1O15239 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NDUFA1O15239 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 AC009949.1-201ENST00000623048 1830 ntBASIC11.92□□□□□ -0.5
NDUFA1O15239 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC11.92□□□□□ -0.5
NDUFA1O15239 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFA1O15239 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms