Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL21O00585 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL21O00585 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 AP000997.3-201ENST00000623333 2250 ntBASIC15.24■□□□□ 0.03
CCL21O00585 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCL21O00585 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL21O00585 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCL21O00585 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL21O00585 CNN2P2-201ENST00000443536 909 ntBASIC15.24■□□□□ 0.03
CCL21O00585 CNN2P3-201ENST00000450201 906 ntBASIC15.24■□□□□ 0.03
CCL21O00585 AC087163.2-201ENST00000457299 853 ntBASIC15.24■□□□□ 0.03
CCL21O00585 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL21O00585 KRT8P48-201ENST00000515599 1220 ntBASIC15.24■□□□□ 0.03
CCL21O00585 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL21O00585 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL21O00585 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL21O00585 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL21O00585 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL21O00585 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL21O00585 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL21O00585 AL136317.3-201ENST00000618497 906 ntBASIC15.24■□□□□ 0.03
CCL21O00585 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 WIZP1-201ENST00000531444 2299 ntBASIC15.24■□□□□ 0.03
CCL21O00585 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCL21O00585 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL21O00585 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CCL21O00585 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL21O00585 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL21O00585 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCL21O00585 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCL21O00585 PKD1P1-201ENST00000458669 6805 ntBASIC15.23■□□□□ 0.03
CCL21O00585 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CCL21O00585 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCL21O00585 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL21O00585 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.23■□□□□ 0.03
CCL21O00585 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL21O00585 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCL21O00585 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL21O00585 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 KRT18P32-201ENST00000424695 1287 ntBASIC15.23■□□□□ 0.03
CCL21O00585 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.23■□□□□ 0.03
CCL21O00585 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL21O00585 SLC25A6P2-201ENST00000497974 877 ntBASIC15.23■□□□□ 0.03
CCL21O00585 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
CCL21O00585 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.23■□□□□ 0.03
CCL21O00585 AC015911.4-201ENST00000588022 1070 ntBASIC15.23■□□□□ 0.03
CCL21O00585 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL21O00585 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL21O00585 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 AL645728.2-201ENST00000641974 660 ntBASIC15.23■□□□□ 0.03
CCL21O00585 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCL21O00585 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CCL21O00585 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL21O00585 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL21O00585 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL21O00585 OR6D1P-202ENST00000641007 5290 ntBASIC15.23■□□□□ 0.03
CCL21O00585 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL21O00585 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL21O00585 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL21O00585 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL21O00585 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL21O00585 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCL21O00585 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL21O00585 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL21O00585 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCL21O00585 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms