Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.02□□□□□ -0.17
SRRM4A7MD48 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SRRM4A7MD48 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
SRRM4A7MD48 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SRRM4A7MD48 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SRRM4A7MD48 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.02□□□□□ -0.17
SRRM4A7MD48 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRRM4A7MD48 AC092053.1-201ENST00000605787 1936 ntBASIC14.02□□□□□ -0.17
SRRM4A7MD48 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 AC106886.4-201ENST00000623557 2502 ntBASIC14.01□□□□□ -0.17
SRRM4A7MD48 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 AC233702.3-201ENST00000578656 1387 ntBASIC14.01□□□□□ -0.17
SRRM4A7MD48 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 TPSP2-201ENST00000561760 610 ntBASIC14.01□□□□□ -0.17
SRRM4A7MD48 AC111152.3-201ENST00000569699 673 ntBASIC14.01□□□□□ -0.17
SRRM4A7MD48 STK25P1-201ENST00000585406 838 ntBASIC14.01□□□□□ -0.17
SRRM4A7MD48 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 LINC02012-201ENST00000608206 1725 ntBASIC14.01□□□□□ -0.17
SRRM4A7MD48 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRRM4A7MD48 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SRRM4A7MD48 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 AL353593.2-201ENST00000602529 1483 ntBASIC14□□□□□ -0.17
SRRM4A7MD48 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14□□□□□ -0.17
SRRM4A7MD48 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 IER3-202ENST00000376377 1350 ntBASIC14□□□□□ -0.17
SRRM4A7MD48 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14□□□□□ -0.17
SRRM4A7MD48 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14□□□□□ -0.17
SRRM4A7MD48 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14□□□□□ -0.17
SRRM4A7MD48 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14□□□□□ -0.17
SRRM4A7MD48 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14□□□□□ -0.17
SRRM4A7MD48 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SRRM4A7MD48 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14□□□□□ -0.17
SRRM4A7MD48 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 DRAXINP1-201ENST00000437611 948 ntBASIC14□□□□□ -0.17
SRRM4A7MD48 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14□□□□□ -0.17
SRRM4A7MD48 VENTXP7-201ENST00000475503 772 ntBASIC14□□□□□ -0.17
SRRM4A7MD48 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14□□□□□ -0.17
SRRM4A7MD48 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14□□□□□ -0.17
SRRM4A7MD48 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14□□□□□ -0.17
SRRM4A7MD48 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14□□□□□ -0.17
SRRM4A7MD48 AP002414.4-201ENST00000589764 1148 ntBASIC14□□□□□ -0.17
SRRM4A7MD48 AC011467.2-201ENST00000598425 242 ntBASIC14□□□□□ -0.17
SRRM4A7MD48 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14□□□□□ -0.17
SRRM4A7MD48 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SRRM4A7MD48 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14□□□□□ -0.17
SRRM4A7MD48 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SRRM4A7MD48 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
SRRM4A7MD48 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SRRM4A7MD48 FUT8-AS1-201ENST00000621019 1521 ntBASIC14□□□□□ -0.17
SRRM4A7MD48 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
SRRM4A7MD48 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms