Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 AL121761.2-201ENST00000598007 1648 ntBASIC21.69■■□□□ 1.06
LAMB4A4D0S4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LAMB4A4D0S4 AC106028.4-201ENST00000614509 607 ntBASIC21.69■■□□□ 1.06
LAMB4A4D0S4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 TFAMP1-201ENST00000412727 736 ntBASIC21.68■■□□□ 1.06
LAMB4A4D0S4 HLA-J-203ENST00000494367 1087 ntBASIC21.68■■□□□ 1.06
LAMB4A4D0S4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LAMB4A4D0S4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 FRMD8P1-201ENST00000440433 1524 ntBASIC21.67■■□□□ 1.06
LAMB4A4D0S4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 AC004835.2-201ENST00000603762 682 ntBASIC21.67■■□□□ 1.06
LAMB4A4D0S4 AP001059.3-201ENST00000619053 235 ntBASIC21.67■■□□□ 1.06
LAMB4A4D0S4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 Z92544.3-201ENST00000624747 417 ntBASIC21.67■■□□□ 1.06
LAMB4A4D0S4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LAMB4A4D0S4 AC069335.1-201ENST00000489972 472 ntBASIC21.66■■□□□ 1.06
LAMB4A4D0S4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
LAMB4A4D0S4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.66■■□□□ 1.06
LAMB4A4D0S4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.66■■□□□ 1.06
LAMB4A4D0S4 AC005498.2-205ENST00000593218 784 ntBASIC21.66■■□□□ 1.06
LAMB4A4D0S4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LAMB4A4D0S4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.66■■□□□ 1.06
LAMB4A4D0S4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
LAMB4A4D0S4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms