Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HFM1A2PYH4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
HFM1A2PYH4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HFM1A2PYH4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HFM1A2PYH4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HFM1A2PYH4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC25.49■■□□□ 1.67
HFM1A2PYH4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC25.49■■□□□ 1.67
HFM1A2PYH4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC25.49■■□□□ 1.67
HFM1A2PYH4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HFM1A2PYH4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
HFM1A2PYH4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HFM1A2PYH4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
HFM1A2PYH4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
HFM1A2PYH4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
HFM1A2PYH4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
HFM1A2PYH4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC25.48■■□□□ 1.67
HFM1A2PYH4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HFM1A2PYH4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HFM1A2PYH4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HFM1A2PYH4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC25.47■■□□□ 1.67
HFM1A2PYH4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC25.47■■□□□ 1.67
HFM1A2PYH4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
HFM1A2PYH4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC25.47■■□□□ 1.67
HFM1A2PYH4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
HFM1A2PYH4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC25.47■■□□□ 1.67
HFM1A2PYH4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC25.47■■□□□ 1.67
HFM1A2PYH4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC25.47■■□□□ 1.67
HFM1A2PYH4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC25.47■■□□□ 1.67
HFM1A2PYH4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC25.47■■□□□ 1.67
HFM1A2PYH4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
HFM1A2PYH4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HFM1A2PYH4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
HFM1A2PYH4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 YBX1P5-201ENST00000509441 847 ntBASIC25.46■■□□□ 1.67
HFM1A2PYH4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 AC004877.2-201ENST00000623941 599 ntBASIC25.46■■□□□ 1.67
HFM1A2PYH4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HFM1A2PYH4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
HFM1A2PYH4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 AC141586.5-201ENST00000624546 2050 ntBASIC25.46■■□□□ 1.67
HFM1A2PYH4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HFM1A2PYH4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
HFM1A2PYH4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
HFM1A2PYH4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HFM1A2PYH4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 UPF3AP3-201ENST00000420996 769 ntBASIC25.46■■□□□ 1.67
HFM1A2PYH4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC25.46■■□□□ 1.67
HFM1A2PYH4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
HFM1A2PYH4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
HFM1A2PYH4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC25.45■■□□□ 1.67
HFM1A2PYH4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC25.45■■□□□ 1.67
HFM1A2PYH4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC25.45■■□□□ 1.66
HFM1A2PYH4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
HFM1A2PYH4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
HFM1A2PYH4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
HFM1A2PYH4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.66
HFM1A2PYH4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC25.45■■□□□ 1.66
HFM1A2PYH4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
HFM1A2PYH4 DNAJB3-201ENST00000446806 729 ntBASIC25.45■■□□□ 1.66
HFM1A2PYH4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
HFM1A2PYH4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC25.45■■□□□ 1.66
HFM1A2PYH4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms