Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
A0A1W2PRF3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
A0A1W2PRF3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
A0A1W2PRF3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.33□□□□□ -0.11
A0A1W2PRF3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
A0A1W2PRF3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
A0A1W2PRF3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
A0A1W2PRF3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.11
A0A1W2PRF3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
A0A1W2PRF3 AL356309.3-201ENST00000624132 1934 ntBASIC14.33□□□□□ -0.11
A0A1W2PRF3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
A0A1W2PRF3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
A0A1W2PRF3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.33□□□□□ -0.12
A0A1W2PRF3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
A0A1W2PRF3 RBM17P3-201ENST00000417687 1192 ntBASIC14.33□□□□□ -0.12
A0A1W2PRF3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
A0A1W2PRF3 AF186996.4-201ENST00000467186 377 ntBASIC14.33□□□□□ -0.12
A0A1W2PRF3 AC122714.2-201ENST00000502787 707 ntBASIC14.33□□□□□ -0.12
A0A1W2PRF3 AC106795.1-205ENST00000512851 1056 ntBASIC14.33□□□□□ -0.12
A0A1W2PRF3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.33□□□□□ -0.12
A0A1W2PRF3 NKAPP1-205ENST00000585790 367 ntBASIC14.33□□□□□ -0.12
A0A1W2PRF3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 SLC25A6P4-201ENST00000586535 553 ntBASIC14.33□□□□□ -0.12
A0A1W2PRF3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
A0A1W2PRF3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
A0A1W2PRF3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.33□□□□□ -0.12
A0A1W2PRF3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
A0A1W2PRF3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 DDX43P3-201ENST00000441064 443 ntBASIC14.32□□□□□ -0.12
A0A1W2PRF3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 SCARNA2-201ENST00000458748 420 ntBASIC14.32□□□□□ -0.12
A0A1W2PRF3 RNPS1P1-201ENST00000507437 918 ntBASIC14.32□□□□□ -0.12
A0A1W2PRF3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
A0A1W2PRF3 FLJ16779-201ENST00000612722 7638 ntBASIC14.32□□□□□ -0.12
A0A1W2PRF3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
A0A1W2PRF3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms