Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A3BPQ9Y5P4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 AC079776.2-201ENST00000641154 1609 ntBASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A3BPQ9Y5P4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 HNRNPDP1-201ENST00000439535 754 ntBASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 AL139327.4-201ENST00000612362 153 ntBASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A3BPQ9Y5P4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 AL023806.1-201ENST00000603994 1649 ntBASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 AC073592.5-201ENST00000624854 528 ntBASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 AL353593.2-201ENST00000602529 1483 ntBASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 LYSMD4-203ENST00000378904 2122 ntBASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL4A3BPQ9Y5P4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms