Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAI2Q9Y5P3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 KRT18P58-201ENST00000527480 1120 ntBASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 NKAPP1-205ENST00000585790 367 ntBASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAI2Q9Y5P3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 AC004817.3-201ENST00000602957 2129 ntBASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 PP12613-201ENST00000424958 2230 ntBASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 SIGLEC30P-201ENST00000455569 941 ntBASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 BX005266.1-201ENST00000473402 457 ntBASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 AL139288.1-201ENST00000623748 933 ntBASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAI2Q9Y5P3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms