Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 UPF3AP3-201ENST00000420996 769 ntBASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 KRT18P27-201ENST00000427733 1299 ntBASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 PRYP5-201ENST00000451909 266 ntBASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 DUTP2-201ENST00000519164 463 ntBASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 AL691403.2-201ENST00000618460 490 ntBASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 AC012317.2-201ENST00000623305 2251 ntBASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 COX5BP2-201ENST00000392354 334 ntBASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 RPSAP43-201ENST00000402237 625 ntBASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 SPDYE21P-201ENST00000413323 827 ntBASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 AC103564.2-201ENST00000432853 1299 ntBASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 SLC25A6P5-201ENST00000435663 894 ntBASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 AC073592.5-201ENST00000624854 528 ntBASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 AC022898.2-201ENST00000616822 1312 ntBASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 SIGLEC16-201ENST00000599858 1437 ntBASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 PP12613-201ENST00000424958 2230 ntBASIC19.66■□□□□ 0.74
HDAC6Q9UBN7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 SIRPAP1-201ENST00000448467 1770 ntBASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 AC073621.1-201ENST00000392730 636 ntBASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 YBX2P1-201ENST00000394192 760 ntBASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 RNA5SP416-201ENST00000516838 111 ntBASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 AC040169.1-201ENST00000565382 521 ntBASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 MIR1199-201ENST00000621445 119 ntBASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC6Q9UBN7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HDAC6Q9UBN7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HDAC6Q9UBN7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
HDAC6Q9UBN7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HDAC6Q9UBN7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HDAC6Q9UBN7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.64■□□□□ 0.73
HDAC6Q9UBN7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms