Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 AC009407.1-201ENST00000568958 598 ntBASIC18.24■□□□□ 0.51
CHD7Q9P2D1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
CHD7Q9P2D1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 MIR4453-201ENST00000584019 89 ntBASIC18.23■□□□□ 0.51
CHD7Q9P2D1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 AC009477.1-201ENST00000452936 217 ntBASIC18.23■□□□□ 0.51
CHD7Q9P2D1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 AP000842.3-202ENST00000569238 1080 ntBASIC18.23■□□□□ 0.51
CHD7Q9P2D1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 AC009118.2-201ENST00000613275 655 ntBASIC18.23■□□□□ 0.51
CHD7Q9P2D1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.23■□□□□ 0.51
CHD7Q9P2D1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 KRT8P23-201ENST00000560090 1207 ntBASIC18.22■□□□□ 0.51
CHD7Q9P2D1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 AL645728.2-201ENST00000641974 660 ntBASIC18.22■□□□□ 0.51
CHD7Q9P2D1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD7Q9P2D1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 MIR346-201ENST00000362234 95 ntBASIC18.21■□□□□ 0.51
CHD7Q9P2D1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD7Q9P2D1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.21■□□□□ 0.5
CHD7Q9P2D1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CHD7Q9P2D1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.21■□□□□ 0.5
CHD7Q9P2D1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CHD7Q9P2D1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 WASH6P-202ENST00000359512 1437 ntBASIC18.2■□□□□ 0.5
CHD7Q9P2D1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms